Rhizobium binae: J2J99_09235
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Entry
J2J99_09235 CDS
T07180
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbq
Rhizobium binae
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_09235
Enzymes [BR:
rbq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J2J99_09235
DNA repair and recombination proteins [BR:
rbq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J2J99_09235
Prokaryotic type
J2J99_09235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QSY83952
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Position
complement(1903865..1905316)
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AA seq
483 aa
AA seq
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MARDATKPVILWFRKDLRLDDNKALNAAHLSGRPIISLYIRELEAAGTGPLGAAQAWWLH
NSLKALDASLRKRHGGLTLASGEALEVLRALIRESDAEAVFWNQRYDPPGISIDARIGHE
LEKQAIEVKSFDGQLLHEPSQLMTGSGTPYRVYTPFWRALESAGEPEPPLDIPSKLQLAS
KLPASEKLESWKLLPTRPDWTSNFADLWKPGEEGAQEKLRTFIENRLDGYKENRDHPAKP
ATSMLSPHLALGEISPARIWDATRGLSKHVPAADIVHFRKEIAWREFSYHLLFHFPRLAS
ANWDDRFDRFEWRSGEENFKAWSRGMTGYPIVDAGMRQLWRYGWMHNRVRMIAASFLIKD
LMVDWRRGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVLQGEKFDPDGDY
VRAHVPELRTLDAKYIHQPFEAPKSVLGEAGVILGETYPKPIVDHAGARNRALAAYNAIK
GVA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttggcaagagacgcgacaaaacctgtcatcctgtggtttcgcaaggatttgcgccttgat
gataacaaggcgctcaacgccgcccatctttcggggcggccgatcatttccctctatata
agggagttggaggctgcgggcaccgggccgctgggggcggcgcaggcctggtggctgcac
aactccctgaaagcgctggacgcgtcgctgcgcaaacggcacggagggctcacgcttgca
agcggcgaagcgcttgaagtgctccgcgccctcatcagggaaagcgacgccgaagccgta
ttctggaatcagcgctacgatccgccgggcatctccatcgacgcccgcatcgggcacgaa
ctggaaaagcaggcgatcgaagtaaaaagtttcgacggccagctactgcatgagccttcg
cagctgatgaccggcagcggcacgccctatcgcgtctatacgccgttttggcgcgctctg
gagagcgccggcgaacccgagccgccgctggacattccgtcgaaactacagctggcatca
aagcttcccgcatcggaaaaactggagagctggaaactgctgccgacgcggccggattgg
acgagtaatttcgccgatctctggaagccgggcgaggaaggcgcccaggaaaagcttcgc
accttcatcgagaataggctcgacggctacaaggaaaaccgggaccatccggcaaagccg
gcgacatcgatgctgtcgccgcatttggcgctcggcgagatctcccctgcccgcatctgg
gatgcgacgcgcggcttgtcgaaacacgtacctgccgccgacatcgtgcatttccgcaag
gaaatcgcctggcgcgaattctcctatcatctactcttccatttcccgcgtcttgcctcg
gccaactgggacgatcgttttgatcgcttcgaatggcgtagcggcgaagagaatttcaag
gcgtggtcccgcggcatgaccggctatccgattgtcgatgccggtatgcgccagctctgg
cgctacggctggatgcacaatcgcgtgcggatgatcgccgcctctttcctcatcaaagac
ttgatggtcgactggcgccggggcgaggcttggttccgggacacgctggtcgatgccgat
ccagccaacaacgcggcaagctggcaatgggtggcgggctccggagcggatgcctcgccg
ttcttccgcatcttcaatccggtgctgcagggcgagaaattcgatcccgacggcgactat
gttcgggctcatgtgccggagcttcggacgctcgacgcaaaatacatccaccagccattt
gaggcgccgaagagtgtgctcggcgaggccggagtcatccttggcgaaacctatccgaaa
cccattgtcgaccatgccggagcccgcaaccgggcgctcgcggcctacaacgccataaag
ggtgttgcatga
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