Rhizobium binae: J2J99_09745
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Entry
J2J99_09745 CDS
T07180
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rbq
Rhizobium binae
Pathway
rbq03410
Base excision repair
rbq03430
Mismatch repair
rbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2J99_09745 (recJ)
03430 Mismatch repair
J2J99_09745 (recJ)
03440 Homologous recombination
J2J99_09745 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_09745 (recJ)
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J2J99_09745 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J2J99_09745 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J2J99_09745 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QSY84045
LinkDB
All DBs
Position
2004803..2006605
Genome browser
AA seq
600 aa
AA seq
DB search
MSDLVDPVQRAFLGVEKSALDNRWVARLDQAGQNRALAMSQLHGLPDLIARVLAGRGVAV
DEAIEFLDPTIRSLMPDPHTLTDCEKAATRLMSAIERGENVAIFGDYDVDGAASSALMFR
FLSHFGVKANIYIPDRIFEGYGPNPAAINQLIDNGARLIVTVDCGSTSHEALAAAVARNI
DVVVIDHHQVTHELPPCHALVNPNREDDLSGQGHLCAAGVVFMVLVATLRLLRAAGNKRI
LALDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAARHQSNAGLAALFRKAGLAGPVT
PYHFGFLIGPRINAGGRIGDAALGSRLLTLDDAGEAEIIAQRLDELNRERQAMEAMMLQE
AEAEALAEYGDGEGASVIVTAHEKWHPGIVGLIAARLKEKFKRPAFAIAFDPSGRGTGSG
RSINGFDMGRMVRAAVDEGLLVKGGGHAMAAGLTVERADLGRLRTFFTEKAARTVANLVA
NETLKIDGAIGASGATLELIDRLEAAGPYGSGHAQPLFAVPAHRVRDARLVGEKHVKVTL
EAMDGSRLDGIAFRAADTTLGNLLVNSRGASLHVAGTLGADHYQGARRIQMRVCDAAPAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctcgtcgatccggtacagcgcgcatttctcggcgtggagaaatccgcactc
gacaatcgctgggtcgcaagactcgaccaggccggccagaatcgggcgctcgccatgtcg
cagcttcacgggctgccggatctgattgcgcgcgttctcgccggacgcggcgttgcggtg
gacgaggcgatcgaatttctcgatccgacgattcgcagcctgatgcccgatccccacacg
ctgaccgactgcgagaaggcggcgacccgcctcatgagcgcgatcgagcgcggcgagaac
gtggcgatcttcggcgactacgacgtcgacggcgcggcctcatcggcgctgatgtttcgc
tttctcagccatttcggcgtcaaggcgaacatctacattcccgaccggatctttgaaggt
tacggccccaatccggcggcgatcaaccagctgatcgacaacggtgcccggctgatcgtc
accgtcgattgcggctccaccagtcacgaggcgcttgcggcggctgtcgcgcgcaatatc
gatgttgtcgttatcgatcaccaccaggtgacacacgagctgccgccctgtcacgcgctg
gtcaacccgaaccgcgaagacgatctctcggggcaggggcatctctgcgcggctggcgtc
gtcttcatggtgctggtggcgacgctgaggctgctgcgcgcggccggcaacaagcgcatc
ctggccctggacctgctgcaatggctggatatcgtcgcgctggcgaccgtctgcgatgtc
gtgccgctgaaggggctcaatcgcgcctatgtggtcaaggggctggtcgctgcccgccac
cagagcaatgccgggcttgccgcactcttccgcaaggccgggctcgccggcccggtgaca
ccctatcatttcggcttcctgatcggcccgcgcatcaatgccggcggacgaatcggcgat
gccgcactcggaagccgcctgttgaccctcgacgatgccggcgaggctgaaatcatcgct
cagcgtctcgacgaactcaatcgcgagcgccaggcgatggaggccatgatgctgcaggag
gcggaagccgaggcgctggccgaatatggcgacggcgagggcgcctccgtcatcgtcacc
gcccacgagaaatggcatcccggcatcgtcgggctgatcgcggcgcggctgaaggaaaag
ttcaaacggccggccttcgcgatcgccttcgatccctccggccgcggcaccggctcgggc
cgctccatcaacggcttcgacatgggcagaatggtgcgggcggcggtcgacgaggggctg
ctcgtcaagggcggcggccacgccatggccgccgggctgaccgtcgagcgcgccgatctc
ggcaggctcagaaccttcttcaccgaaaaggcggcaaggacggtggcgaacctcgtcgcc
aacgagacgctgaagatcgacggggcgatcggcgccagcggcgccacgctcgaactcatc
gaccgtctggaagcggccggcccctacggttccggccacgcccagccgctctttgccgtg
ccggcgcaccgcgtgcgcgacgcccgcctggtcggcgagaaacatgtgaaggtgacgctg
gaggcaatggacgggtcgcggctcgatggaatcgcattccgcgccgccgatacgacgctc
ggcaaccttctcgtcaattcacgcggcgccagcctgcatgtggcgggtacgctcggcgcc
gatcattaccagggcgcccgccgcattcagatgcgcgtctgcgatgccgcgccggcaaaa
tag
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