KEGG   Rhizobium binae: J2J99_10140
Entry
J2J99_10140       CDS       T07180                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rbq  Rhizobium binae
Pathway
rbq00010  Glycolysis / Gluconeogenesis
rbq00020  Citrate cycle (TCA cycle)
rbq00260  Glycine, serine and threonine metabolism
rbq00280  Valine, leucine and isoleucine degradation
rbq00310  Lysine degradation
rbq00380  Tryptophan metabolism
rbq00620  Pyruvate metabolism
rbq00630  Glyoxylate and dicarboxylate metabolism
rbq00640  Propanoate metabolism
rbq00670  One carbon pool by folate
rbq00785  Lipoic acid metabolism
rbq01100  Metabolic pathways
rbq01110  Biosynthesis of secondary metabolites
rbq01120  Microbial metabolism in diverse environments
rbq01200  Carbon metabolism
rbq01210  2-Oxocarboxylic acid metabolism
rbq01240  Biosynthesis of cofactors
Module
rbq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rbq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rbq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rbq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rbq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    J2J99_10140 (lpdA)
   00020 Citrate cycle (TCA cycle)
    J2J99_10140 (lpdA)
   00620 Pyruvate metabolism
    J2J99_10140 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    J2J99_10140 (lpdA)
   00640 Propanoate metabolism
    J2J99_10140 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    J2J99_10140 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    J2J99_10140 (lpdA)
   00310 Lysine degradation
    J2J99_10140 (lpdA)
   00380 Tryptophan metabolism
    J2J99_10140 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    J2J99_10140 (lpdA)
   00670 One carbon pool by folate
    J2J99_10140 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rbq04147]
    J2J99_10140 (lpdA)
Enzymes [BR:rbq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     J2J99_10140 (lpdA)
Exosome [BR:rbq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   J2J99_10140 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored NAD_binding_8 GIDA HI0933_like DAO Thi4 Amino_oxidase 2-Hacid_dh_C Lys_Orn_oxgnase XdhC_C 3HCDH_N
Other DBs
NCBI-ProteinID: QSY84110
LinkDB
Position
2076832..2078277
AA seq 481 aa
MAESYDVIIIGSGPGGYVAAIRASQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDFGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKLTKP
GEIVVGKSSKPVVEPQHPLPKNVKGGGTYNAKHIIIATGARPRALPGIEPDGKLIWTYFE
ALKPDALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITAIARKQLE
KRGLKIFTSAKVTKVEKGAGSITAHVETSDGKVQQITADRMISAVGVQGNVENLGLEALG
IKTDRGCVVADGYGRTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKG
KVPGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctcgggccctggcggctatgtcgccgcc
atccgcgccagccagctcggcctcaagaccgctatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcatccccaccaaggcgctgctgcgctcggccgaagtgctc
gatcacgccaatcacttcaaggatttcggtctcgttctcgaaggcacggtcaagccggac
gccaaggccgtcgtcggccgctcgcgcgccgtctccgcccgtctcaatgccggcgtcggc
ttcctgatgaagaagaacaagatcgatatcatctggggcgaagcgaagttgacgaagccc
ggcgagatcgtcgtcggcaaatcgtcgaagcctgtcgtcgagccgcagcatccgctgccg
aagaacgtcaagggcgggggcacctataatgccaagcacatcatcatcgcgaccggcgcc
cgcccgcgcgcgctgccgggcatcgagccagatggcaagctgatctggacctatttcgag
gcgctgaagcccgacgcgctgccgaagtcgctgatcgtcatgggctcgggcgcgatcggc
atcgaattcgctagcttctaccgctcgatgggcgtcgatgtgacggttgtcgaagtcatg
ccgaccatcatgccggtcgaggatgccgaaatcaccgccatagcccgcaagcagctggaa
aagcgcggcctgaagatcttcaccagcgccaaggtgacgaaggtcgagaagggtgcgggc
agcatcaccgcccatgtcgagacgtcagacggcaaggtccagcagatcaccgctgaccgg
atgatctccgccgtcggcgtccagggcaacgtcgaaaatctcggcctggaagcgctcggc
atcaagaccgaccgcggctgcgtcgtcgccgacggttacggcaggaccaatgtcgccggc
atctatgcgatcggcgacgtcgccggcccgccgatgctggcgcacaaggccgagcatgaa
ggcgtggtctgcgtcgaaaagatcgccggcctgccgaacgtgcatccgaccgacaagggc
aaggttcccggctgcacctattgcaacccgcaggtcgcctccgtcggtctcaccgaggcc
aaggccaaggagctcggccgcgacatccgcgtcggccgtttctcttttgcggccaacggc
aaggcgatcgcgctcggcgaagaccagggcatggtgaaagtgatcttcgacaagaagacc
ggcgagctgctcggcgcccacatggtgggcgccgaggtcaccgaactcatccagggcttc
gtcgtcgcgatgaacctagagacgacagaggaagagctgatgcacacgatcttcccgcat
ccgaccgtctccgaaacgatgaaggaagcggtactcgatgcctacggccgtgtgctgaac
gcttga

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