Rhizobium binae: J2J99_13370
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Entry
J2J99_13370 CDS
T07180
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rbq
Rhizobium binae
Pathway
rbq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J2J99_13370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_13370 (uvrB)
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2J99_13370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J2J99_13370 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
SWI2_SNF2
DUF87
Microtub_bd
UB2H
DUF2963
Motif
Other DBs
NCBI-ProteinID:
QSY80707
LinkDB
All DBs
Position
2718059..2721085
Genome browser
AA seq
1008 aa
AA seq
DB search
MAKAPKKSPTSNGFEEAPQSSFEGAPLSGSVADWVKQLEADAEASGVESQREIASKAGKH
RKAVENQARKHSEAVNVNKKATASKTARGVSIGGSTDPKTRAAAGLNPVAGLDISLEDAG
SISPGGVTATVEALSKLIESGNPLHKNGKIWTPHRPARPDKSEGGITIRMDSEYKPAGDQ
PTAIRDLVEGLQSGERSQVLLGVTGSGKTFTMAKVIEETQRPAVILAPNKTLAAQLYSEF
KNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCI
IVASVSCIYGIGSVETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMDFTRGSFRVRG
DTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKVGDLKSVKIYANSHYVTPRPTLN
GAIKSIKEELRLRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRD
PGDPPPTLFEYIPDNAIVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPL
RFEEWDAMRPDTIAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDDVLG
EIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAF
DVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQV
TGSMQRAMDETARRREKQMAYNLENGITPESVKAKISDILDSVYERDHVRADISGVSGKG
FADGGNLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELAVMDDPMARE
ESKAMEGKGGRPNGKNRTPSSSGSPHGDEAQRAVLNDEGGRGISYFSKPSLDDMGPGTDT
TTPLFRKPHLDEMGRDPTTPAGKSLFRKNDLDEMTVGRTEKPVTGRVPEKPDALKSTRRF
SPLLEGQPEHDDGVRPVVRGRVGAGSYEEPAEQKRKGRTKGKTGRPGR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctccgaaaaaatctccgacctcgaatggtttcgaggaagccccgcaatcg
tcctttgaaggcgcccccctctccggctccgtcgccgattgggtgaagcagctggaggcc
gatgccgaagcctccggcgtcgaaagccagcgcgagattgcttcgaaagcgggcaagcat
cgcaaggcggtggaaaaccaggcgcgcaagcattcggaagccgtcaacgtcaacaagaag
gcgacggcgagcaagaccgcgcgcggtgtctcgatcggcggttccactgacccgaagacc
cgcgccgccgccggcctcaaccccgtcgccggtctcgacatttcgctcgaggatgccggc
agcatctcgcccggcggcgtcacggccactgtcgaggcgctgtcgaagctgatcgagagc
ggcaacccgctgcacaagaacggcaagatctggaccccgcatcgccctgcccggccggac
aagtccgaaggtggcatcaccatccgcatggactccgaatataagcccgccggcgaccag
ccgactgcgatccgcgatctcgtcgagggcctgcagagcggcgagcgcagccaggtgctg
ctcggcgtcaccggctcgggcaagaccttcaccatggcgaaggtgatcgaggaaacgcag
cgcccggccgtcatcctggcgccgaacaagacgctggccgcccagctctattccgaattc
aagaatttcttccccgacaatgcggtggaatatttcgtttcctactacgattattaccag
ccggaagcctatgtgccgcgctccgacacctatatcgagaaggaatcctccatcaacgaa
cagatcgaccggatgcgccactcggcgacgcgctcgctgctcgaacgcgacgattgcatc
atcgtcgcctcggtctcctgcatctatggtatcggctcggtcgagacctatacggccatg
accttccagatgaatgtcggcgaccggctggaccagcgccagctgctggccgacctcgtc
gcccagcaatacaagcgccgcgacatggacttcacccgcggcagttttcgcgtgcgcggt
gacacgattgagatcttccctgcccacttggaagacgcggcctggcgcataagcatgttc
ggcgatgagatcgacgccatcaccgaattcgatccgctgaccggccagaaggtcggcgac
ctgaaatcggtcaagatttacgccaattcgcactatgtcacgccgcgcccgacgctgaac
ggcgccatcaaatcgatcaaagaagagctccgccttcgtctcgccgaactggaaaaggcc
ggccgcctgctcgaggcccagcgcctggagcagcgcacccgctacgacatcgagatgctg
gaagcgactggttcctgccagggcatcgagaactattcgcgctatctcaccggccgcgat
cccggcgatccgccgccaacgctgttcgaatatatccccgacaacgccatcgtcttcatc
gacgaaagccatgtcaccgtgccgcagatcggcggcatgtatcgcggcgacttccgacgc
aaggcgacgctggccgaatatggcttccgcctgccctcctgcatggacaaccggccgctg
cgcttcgaggaatgggacgccatgcgccccgacaccatcgcggtttcggccacaccaggc
agctgggagatggaacagtccggcggcgtcttcgccgaacaggtgatccgcccgaccggc
ctcatcgatccgccggtcgaggtccgttccgcccgcacccaggtcgacgacgtgctcggc
gaaatccgcgagaccgcggccaagggctaccgcacgctctgcaccgtgctgaccaagcgc
atggccgaggatctgaccgaatatctgcacgaacagggcgtgcgtgtgcgctacatgcac
tccgacatcgacacactggagcgcatcgagatcatccgcgacctgcgcctcggcgccttc
gacgtgctcgtcggcatcaacctgctgcgtgagggcctcgacattcccgaatgcggcttc
gtcgccattctcgacgccgacaaggaaggttttttgcgttcggaaacctcgctgatccag
acgattgggcgcgccgcccgtaacgtcgacggcaaggtcatcctctatgccgatcaggtc
accggctcgatgcagcgcgccatggacgaaaccgcccgccgccgcgaaaagcagatggcc
tataacctcgaaaacggtatcacgccggaatcggtcaaggccaagatctccgacatcctc
gactctgtttacgaacgcgaccacgtccgcgccgacatctcaggcgtctcgggcaaaggc
ttcgccgatggcggcaacctggtcggcaacaacctgcaggcccatctcaacgcgctcgaa
aaaagcatgcgcgacgccgccgccgacctcgacttcgaaaaagccgcccgcctccgcgac
gagatcaaacgcctcaaagccgccgaactggcggtcatggacgatccgatggcgcgcgaa
gagtcgaaggcgatggaaggcaaaggcggccgtcccaatggtaagaatagaaccccgagc
tccagtggtagccctcatggtgatgaggcccagagggccgttttgaacgacgagggcggg
cgcggaatctcctacttctccaagccctccctcgacgacatgggcccgggcaccgacacg
accacgcccctcttccgcaagccccatctcgatgaaatgggccgcgaccccaccaccccc
gccggcaagagcctcttccgcaagaacgacctcgacgagatgacggtcggccgcacggag
aagcctgtgaccggccgcgtgccggaaaagccggatgcattaaagagcacgaggcgcttt
tcgccgctgctggagggacagccggaacacgatgacggcgtacggccggtggtgcgcggc
cgcgtgggcgccgggagctacgaggagccagctgagcagaagcgcaaggggcggacgaag
gggaagaccggacggcccgggcgatga
DBGET
integrated database retrieval system
