Rhizobium binae: J2J99_14855
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Entry
J2J99_14855 CDS
T07180
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbq
Rhizobium binae
Pathway
rbq03420
Nucleotide excision repair
rbq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J2J99_14855
03430 Mismatch repair
J2J99_14855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_14855
Enzymes [BR:
rbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2J99_14855
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2J99_14855
MMR (mismatch excision repair)
Other MMR factors
J2J99_14855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QSY84435
LinkDB
All DBs
Position
3012600..3015071
Genome browser
AA seq
823 aa
AA seq
DB search
MSNSFDDIPFFDEEPGEMARKPQLPAAPVGRAAGGIAARAMAARDGGKRPDYLAGLNPEQ
TEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNSGRAFPSQILAVTFTNKAAREMKERI
ALLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLSSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLSTLNACDFGD
LLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRSKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGTAAHLIAHNEGRLGKT
LFTERADPDDVKVQVHASWDSEEEARAIGEEIEQLQRNKHLLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQPADDLAFERIINTPKRGLGDTTVRA
LHDYARARDIPMLAAAADMIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAEQIL
EESGYTDMWKNDKSAEAPGRLENLKELIRSMDSFESMRGFLEHVSLVMDAETNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRCHIW
FVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKAEPFANSY
STPGWKRAQANRTDATRDNWGTRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPSRFT
LGDRVFHMKFGNGNITGIEGNKLTIDFDRAGQKRVLDGFVERV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtttcgacgatattcccttcttcgacgaagagccgggcgagatggcgcgc
aagccacagctgcctgccgcaccggtcggaagggcggccggcgggatcgccgcccgagcc
atggcggcgcgcgacggcggcaagcgaccggattacctcgccggccttaatcccgaacag
acggaagccgtggaaaccctggaaggtccggttctcgtccttgccggcgccggcaccggc
aagacgcgggtgctgaccacgcgcatcgcccatatcctcaatagcggccgcgccttcccc
tcgcagatcctcgccgtcaccttcaccaacaaggcagcgcgcgagatgaaggaacgcatc
gcgctgctcgtcggcggcgccgtcgaaggcatgccctggctcggcaccttccattctatc
ggcgtcaagcttctgcgccgccacgccgagctcgtcggcctcagctccgacttcaccatt
ctcgacaccgacgacgtcgtccgtctgatcaagcagctgatccaggccgagggtctcgac
gacaaacgctggccggccaagcagttcgccggcatgatcgacacctggaagaacaagggc
ctcggcccagccgatattcccgaaggcgacgcccgcgcctttgccaatggccgcggccgc
gatctctatttcgcctaccaggcgcgcctgtcgacgctgaatgcctgcgatttcggcgac
ctgctgatgcatccgatcgcgatcttccgcaagaatccggacctcctgaaggaatatcac
ggccgcttccgctacattctcgtcgatgaatatcaggataccaacaccgcccaatatatg
tggctgaggctgcttgcccagcgcagcaagggcgagccgcagaatgtctgctgcgtcggc
gacgacgaccagtccatctacggctggcgtggcgcggaggtcgacaatatcctgcgcttc
gagaaggatttccccggcgccaaggtgatcaagctcgaacgcaattaccgctcgaccgaa
catatcctcggaaccgccgcccatctgatcgcccacaatgaaggccgcctcggcaagacg
ctgttcaccgaacgcgccgatcccgacgacgtcaaggtgcaggtccacgcctcctgggat
tcggaggaggaagcccgcgccatcggcgaggagatcgagcagctccagcgcaacaagcat
ctgctgaacgacatggcgatccttgtgcgcgcctccttccagatgcgcgaattcgaagac
cgcttcgtcaccctcggcctcaactaccgcgtcatcggcggcccacgcttctacgagcgc
ctcgaaatccgcgatgccatggcctatttccgcctggtcgcgcagccggccgacgacctc
gccttcgagcgcatcatcaatacgccgaagcgcggcctcggcgacacgacggtgcgcgcc
ctgcacgactatgcgcgggcccgcgacatcccgatgctggcggcagcggccgacatgatc
gagaccgacgagctgaagccgaaggcgcgtaaagccctcttcgacgtgattcaatctttc
cgccgatggcaggaactgcttgaaaacacaccgcataccgagcttgccgagcagatactc
gaagagtccggctatacggatatgtggaagaacgacaagagcgccgaagcgcccggccgc
ctcgaaaacctgaaggaactgatccgctcgatggacagcttcgagtcgatgcgcggcttc
ctcgagcacgtctcgctcgtcatggatgcagagaccaacgagaacctcgacgccgtctcg
atcatgacgctgcattcggccaagggcctggaattcgataccgtctttctgccgggatgg
gaggaaggcctctttccgcaccagcgctcgctggatgagagcggccgtgccggtcttgag
gaagaacgacggctcgcctatgtcggcatcacccgtgccaagcgccgctgccatatctgg
ttcgtctccaatcgccgcatccacggcctctggcaatcgacgctaccctcgcgtttcctc
gacgaactgccggaaacccatgtcgaggtcgccgagatggagcagagctacggcggttac
ggccgcggtggctatggccagtcacgcttcgacaaggccgaaccctttgccaactcctat
tccacgccaggctggaaacgcgcccaggccaacaggaccgacgccacgcgcgacaactgg
ggcacccgttccggccacgccgtcgagcgcatcggctatggcgaaagcggtccgaaggga
cgcacgatcgagggcgaactggtcgcaaagtcgacctcgtcggagccgtcgcgcttcacc
ctcggcgatcgcgtattccacatgaaatttggcaatggcaacattaccggcatcgaaggc
aacaagctgacgatcgacttcgaccgtgcggggcagaagcgggtgctggacggtttcgtc
gagcgcgtctga
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