Rhizobium binae: J2J99_20550
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Entry
J2J99_20550 CDS
T07180
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rbq
Rhizobium binae
Pathway
rbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J2J99_20550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_20550
Enzymes [BR:
rbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2J99_20550
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J2J99_20550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_22
Zn_ribbon_Com
Motif
Other DBs
NCBI-ProteinID:
QSY81988
LinkDB
All DBs
Position
complement(4213905..4216121)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTDSSDLFGALFEAPPLNRTVPVLVPMPAPKPYSYSVPDDMAVEPGSVVQVPLGPRQVI
GVVWDGGEDGIDPKKLRPISHVFDCPPLSREMRDFIDWVASYTLSPPGLVARMALRAPNA
FEPEPMVEGLKFVGGEPERLTPARARVLETASDGLSWTRSGLAHAAGVSTSVVDGLVTLG
IFETIFLPPPPVVAMPDPDFAAARLEGPQKEAAAEIVSDVRKGEFCVSLIDGVTGSGKTE
VYFEAIAETLKRGRQVLILLPEIALTASFMERFQDRFGAKPAEWHSDLAPRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFPV
ILVSATPSVESQVNGQNGRYSTVHLPTRFGDAALPDLHLIDMRRHAPERGGFLSPVLIRA
IGKTVERREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDIMGGVKRLRLELDAIA
RGEADIVIGTQLVAKGHNFPLMTLVGIIDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSDAFYEREITERERAALPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQVSGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRAMLSQSP
KERGSVQVQLDIDPQSFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagattcgtccgatctttttggcgcactgttcgaagcaccgcccctgaaccga
acggttccggtgctggtaccgatgccggcgccgaaaccctattcctattcggtgcccgat
gacatggcggtcgagcccggctcggtcgtgcaggtgccgcttgggccgcgacaggtgatc
ggcgtcgtctgggacggcggcgaggatggcatcgatccgaagaagctccgtccgatcagc
catgtcttcgactgcccgccgctttccagggagatgcgggatttcatcgactgggtggcg
agctatacgctctcgccgcccgggctcgtcgcacgcatggcgctgagggcgccgaacgcc
ttcgagcccgagccgatggtcgaggggctgaagttcgtcggcggcgaaccggagcggctg
acaccggcgcgtgcgcgcgtgctcgagaccgcgtccgacggcttgtcctggacgcgcagc
ggcctggcgcatgcggcgggcgtttcgaccagcgtcgtcgatgggctggtcacgctcggc
atcttcgagacgatattcctgccgccgccgccggtcgtggcgatgcccgatcccgatttt
gctgccgcacgtctcgaagggccgcagaaagaggcggctgcggagatcgtctccgacgtt
cgcaagggcgaattttgcgtatcgctgatcgacggtgtcaccggctccggcaagaccgaa
gtctatttcgaagcgatcgccgagacgctaaaacggggcaggcaggtcctgatcctgctg
ccggagatcgcgctgaccgccagtttcatggaacgtttccaggatcgcttcggggcaaaa
cccgccgaatggcattccgacctcgccccgcgcatgcgcgaaaaagtctggcgccaggca
gtgaccggcgaagtgcgcgtcgtggccggcgcccgttcggcgcttttcctgcctttcgag
gatctcgggctcatcatcgtcgacgaggagcacgatcctgcttacaagcaggaagatcgc
gtcttctacaatgcccgcgacatggccgttgtgcgcggccgcatcggcgattttcccgtc
atcctggtctcggcgacgccgtcggtggaaagccaggtcaacggccagaacggccgctac
agcaccgtccatctgccgactcgtttcggcgatgcggcgcttccggacctgcatctcatc
gatatgcgcaggcacgcgccggagcgcggcggcttcctgtcgccagtgctgatccgggcg
atcggcaagacggtggagcggcgcgaacaggcgctgctctttctcaaccggcgtggttat
gcgccgctgacgctctgccgggtctgcggtcaccgcttccaatgcccgcaatgttcgagc
tggctggtcgagcatcgtttccgcaagcagttgcagtgccatcaatgcgggcacgccgag
cgcacgccggaagcatgcccggaatgtggcacgctcgaccatctcgtcgcctgcgggcct
ggcgtcgaacgcattgccgaagaggtggagcggcatttcccggaggcgcggacgatcgtt
ctgtcctcggatatcatgggcggcgtgaagcggctgcggctggagctcgatgccattgcc
aggggcgaggccgatatcgtcatcggcacccagctcgtcgccaagggccataattttccg
ctgatgacgctggtcggcatcatcgacgccgatctcggcctcgccaatggcgatccgcgt
gcggccgagcgcaccttccagcttctgtcgcaggtgaccggccgggccgggcgcacaggg
ctcaagagccatgggctgctgcagacctaccagccgcagcatcccgtgatgcaggcgatt
gtatcaggcgattccgatgccttttacgagcgcgagatcaccgagcgcgaacgcgctgca
ctaccgcccttcggccggctggcttcgatcatcgtatcggcagaaacccgccacgacgcc
gaaaaccatgcgcgcggcatgcgcaacgccgcaccccaggtgtccggcatctcggtgctc
ggcccggcggaggcgccgctggcgctggtgcgcggccgccaccgcttccggcttctggtg
cacggacgacgcaactccgacatgcagggcttcctgcgggcgatgctgtcgcaatcgccg
aaggagcgcggatcggtgcaggtgcagctcgatatcgatccgcaaagctttctgtag
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