Rhizobium binae: J2J99_20630
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Entry
J2J99_20630 CDS
T07180
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rbq
Rhizobium binae
Pathway
rbq00020
Citrate cycle (TCA cycle)
rbq00640
Propanoate metabolism
rbq00660
C5-Branched dibasic acid metabolism
rbq00720
Other carbon fixation pathways
rbq01100
Metabolic pathways
rbq01110
Biosynthesis of secondary metabolites
rbq01120
Microbial metabolism in diverse environments
rbq01200
Carbon metabolism
Module
rbq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rbq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J2J99_20630 (sucD)
00640 Propanoate metabolism
J2J99_20630 (sucD)
00660 C5-Branched dibasic acid metabolism
J2J99_20630 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
J2J99_20630 (sucD)
Enzymes [BR:
rbq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
J2J99_20630 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSY82004
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All DBs
Position
complement(4232229..4233131)
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AA seq
300 aa
AA seq
DB search
MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF
ATVAEGKEKTGADATVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR
SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADEATRSIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIRVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcaacaaagacaccaaggttctcgttcagggcctaaccggcaagacc
ggaaccttccacaccgaacaggcgcttgcctattacggcacgcagatggtcggcggtatc
cacccgaagaagggtggcgaaacctggaccggcgcaaagggcgaaagcctgccgatcttc
gcaaccgttgccgaaggcaaggaaaagaccggcgccgacgcgaccgtcatctacgttccg
ccggcgggtgcggccgatgcgatcatcgaggcgatcgacgccgagatcccgttcatcacc
tgcatcaccgaaggcatccctgtgatggacatggtgcgcgtcaaggcgcgcctcgaccgc
tccaagtcgcgcctgctcggccccaactgccctggcatcctgacgccggaagaatgcaag
atcggcatcatgccgggctcgatcttccgcaagggttcggtcggtatcgtctcccgttcg
ggcacgctgacctatgaagccgtgttccagacctccaacgagggtcttggccagacgacg
gccgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtcttggaaatg
ttcctggccgacgaagccacccggtcgatcatcatgatcggcgaaatcggcggttctgca
gaggaagacgctgcgcagttcctcaaggacgaagccaagaagggccgcaagaagccgatg
gccggcttcattgccggccgtacggcgccgaagggccgcaccatgggccatgccggcgcc
gtggtgtccggcggcaagggcgatgcggaatcgaagatcgcggcgatggaatcggcaggc
attcgtgtctcgccgtctccggcccgcctcggcaagaccttggttgaagttctcaagggc
taa
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