Rhizobium binae: J2J99_24190
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Entry
J2J99_24190 CDS
T07180
Name
(GenBank) HAMP domain-containing protein
Organism
rbq
Rhizobium binae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
DUF5983
PA-IL
RNase_Y_N
OKR_DC_1_N
YscO-like
IFT57
ATG14
OmpH
Motif
Other DBs
NCBI-ProteinID:
QSY84688
LinkDB
All DBs
Position
p1:485922..492224
Genome browser
AA seq
2100 aa
AA seq
DB search
MSTQTGEFSRDNAAAESLNGHDHKSMAFDDASALLEVLVAVRRGDFSVRMRSDLTGVTGK
VADALNDIIAANQRMAQQLEHVGQVVGRDGRTSTRVRFGLSDGCWSEMEGSINDLIDDLL
WPTTAVTRTITAVAKGDLLQTVPLDVDGRPLKGEFLRSADIVNTMIKQLSVFTSEVTRVA
REVGTDGKLGGQAQVPEVTGVWKDLTESVNSMASNLTAQVRNIAEVTIAVANGDLSKKIT
VDVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTEGKLGGQALVPGVAGTWKDLTDS
VNAMCGNLTAQVRNIAQVTTAVARGDLSRKITVDVSGEILELKETINTMVDQLNGFAGEV
TRVAREVGTEGRLGGQAQVPGVAGTWKDLTDNVNSMASNLTAQVRNIAEVSTAIANGDLS
KKITVSVSGEILELKETINTMVDQLNAFASEVTRVAREVGTEGRLGGQANVRGVAGTWKD
LTENVNSMAGNLTAQVRNIAEVSTAIANGDLSKKITVPVSGEILELKETINTMVDQLNGF
AGEVTRVAREVGTEGRLGGQANVRGVAGTWKDLTDSVNSMASNLTGQVRNIAEVATAVAQ
GDLSKKITVPVSGEILELKETINTMVDQLNGFAGEVTRVAREVGTEGRLGGQANVLGVAG
TWKDLTDSVNSMAGNLTAQVRNIAEVSTAIANGDLSKKITVSVSGEILELKETLNTMVDQ
LNRFASEVTRVAREVGTEGKLGGQAQVPGVAGTWKDLTENVNSMASNLTGQVRNIAEVTT
AVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQAQVS
GVAGTWKDLTDSVNSMAGNLTAQVRNIAEVATAIANGDLSRKITVDVRGEILLLKDTLNT
MVDQLRSFAGEVTRVAREVGTDGRLGGQAVVPGVAGTWKDLTDNVNLLAANLTTQVRNIA
EVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQ
AQVPGVAGTWKDLTDTVNVMAANLTEQVRGIVKVVTAVANGDLKQNLTVASKGEVAALAE
TINNMTNTLATFADQVTTVAREVGVEGRLGGQANVPGTAGTWKDLTGNVNLLAANLTTQV
RAIAEVATAVTKGDLTRSIKVDARGEVAELKDNINTMIDNLRLTTERNTEQDWLKTNLAR
FTNMLQGQRDLTLVGKMLLSELAPLVGAHQGVIYQVDADENQPFLSLLSVYAQGGEAAHP
PRLDFGQGLVGQCASDARRILVTDLPENVVPISSGVFTTLPRSAIVLPVHFEGQVKAVIE
LASAGEFTELQLSFLDQLTTSIGIVLNSIEATMQTEGLLKQSQQLAAELQTQQRELQQTN
EQLGQKAQQLEERNVEVEAKNQEIEQARRALEEKAAELALTSKYKSEFLANMSHELRTPL
NSILILGQQLGENPDGNLSGKQVEFAKTIHGAGTDLLNLISDILDLSKIESGTVSVDAEE
IFVSNLLEVMARPFRHEAETRNLSFAVEVGADVAKSIITDSKRLQQILKNLLSNAFKFTA
QGGVTLRVASATGGWSSDHPSLRHAPSVIAFEVVDTGIGIPPEKQRIIFEAFQQADASTS
RKYGGTGLGLAISRELANLLGGEIQLRSTPGVGSTFVLYLPLTYVGAGAVAPRPVPAPAN
VVEFAEAAASRRAEKPAEHVADDRNRLEAGDSVLLVVEDDAHYARVLVDLARDNGFKVLV
AMRGSDALTLAQEYKPSAISLDIFLPDMLGWTVLSQLKQNPQTRHIPVQIISLDEDRQHG
LTRGAFAFMSKPTTPEGLGKALSRLKAYAEPRRKQLLLVEDDEAERLSVTALLGHDDIDI
TSVGSGSEALAALRRNTPDCVVLDLSLPDMSGFEVLEQIRDDLEIGEVPVVVFTGRELSA
EEDATLHSMARSVVVKGVESPERLLDETALFLHRVVADLPAAKQATLQELHSSDEDLVGE
TVLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNEPSVAIVLMDIMMPGMDGY
ETMQVIRSELRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLHR
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcaaaccggtgaattttcgcgcgacaacgctgcggccgagagcctcaacggg
catgaccacaaaagcatggcgttcgacgatgccagcgcccttctcgaagtgctggtcgca
gtcagacgcggtgatttttccgtacggatgcgctccgacctgaccggtgttaccggcaag
gtcgccgacgccctcaacgacattattgccgccaatcagcgcatggcccagcagcttgaa
catgtcggccaggtcgtcggccgtgacgggcgaacgagcacgcgggtgcgcttcggcctt
tccgacgggtgctggtccgagatggaggggtcgatcaacgatttgatcgacgatctgctg
tggccgacgacggcggtgacgcgcacgatcacggcggtcgccaagggtgacctgctgcag
accgtgccgctcgatgtcgacggtcggccgctcaagggtgagttcctgcgctcggccgat
atcgtcaacacgatgatcaagcagctgagcgtcttcacctcggaggtgacccgtgtcgcc
cgcgaggtcggcaccgacggcaagctcggcggccaggcgcaggtgcccgaggttaccggc
gtgtggaaggacctgaccgaaagcgtgaattcgatggcctcgaacctgacggcgcaggtg
cgcaacatcgccgaagtgacgatcgccgtggccaacggtgatctttcgaagaagatcacc
gtcgacgtgcgcggcgaaatcctgcagctgaaggaagcgatcaacaccatggtcgaccag
ctgcgctccttcgcttcggaagtgacgcgtgtcgcccgcgaggttggcacggaaggcaag
ctgggcggccaggcgctggtgccgggtgtggccggcacctggaaggatctgaccgacagc
gtcaatgccatgtgcggtaatctgacggcccaggtgcgcaacatcgctcaggtgacgacg
gccgtggcgcgcggtgacctgtcgcgcaagatcaccgtcgacgtctcgggcgaaatcctc
gagctcaaggaaaccatcaacaccatggtggatcagctcaacggcttcgccggtgaggtg
acgcgcgtggcgcgcgaggtcggcaccgagggccggctcggcggtcaggcgcaggtgccg
ggtgtcgccggcacctggaaggacctgaccgacaacgtcaattccatggcctcgaacctg
acggcacaggtgcgcaacatcgccgaggtttccactgcgatcgccaatggtgacctgtcg
aagaagatcactgtttcggtgtcgggcgaaatcctcgagctgaaggaaaccatcaacacg
atggtcgaccagttgaacgcctttgcctcggaagtgacacgcgtcgcccgcgaagtgggc
acggaaggccggctcggcggccaggccaatgtgcgcggcgtcgccggcacctggaaggac
ctgaccgaaaacgtcaactcgatggcgggcaacctgacggcacaggtgcgcaacatcgcc
gaggtttccaccgcgatcgccaatggcgacctgtcgaagaagatcacggtcccggtttcg
ggcgaaattctcgagctgaaggaaaccatcaacacgatggtcgaccagttgaacggtttt
gccggcgaagtgacgcgtgtggcgcgcgaggtcggcacggaaggacggctcggcggccag
gcgaacgtgcgcggtgtggccggcacctggaaggatctgaccgacagcgtcaattccatg
gcctccaacttgaccggccaagtgcgtaacattgccgaagtcgcgaccgcggtcgcccag
ggcgacctgtcgaaaaagatcaccgttccggtatcgggcgaaatcctggagctgaaggaa
accatcaacacaatggtcgatcagctgaacggctttgccggcgaggtgacgcgcgtggcg
cgcgaggtcggcaccgaaggccggctcggcggccaggcgaatgtgctcggcgtcgcgggc
acctggaaggatctgaccgacagcgtcaactcgatggccggcaacctgacggcacaggtg
cgcaatatcgccgaagtctcgaccgcgattgccaatggcgacctgtcaaagaagatcacc
gtgtcggtctcgggcgaaatcctcgagctcaaggaaacgctgaacaccatggtggatcag
ctgaaccgcttcgcttcggaagtgacgcgcgtcgcccgcgaagtcggcaccgaaggcaag
ctcggcggccaggcgcaggtgccaggtgtcgccggcacctggaaggacctcaccgaaaac
gtcaactccatggcctccaacctcaccggccaggttcgaaacatcgctgaggttacgacc
gccgtggcgcgcggcgacctctcgcggaagatcaccgtcgacgtgaagggcgaaatcctc
gagctgaagaacaccatcaataccatggtggaccagctgaacgccttcgccggcgaagta
acgcgtgtggcccgcgaggtcggcacggaaggcaagctcggcggtcaggcgcaggtctcc
ggggtagccggcacctggaaggatttgaccgacagcgtcaactcgatggccggcaacctg
acggcacaggtgcgtaatattgccgaggtggcgacggcgatcgccaatggcgacctgtcg
cgcaagatcaccgtcgacgtgcgcggcgaaatcctgctgctgaaggacacgctgaacacc
atggtcgatcagcttcgctcctttgccggcgaagtgacgcgtgtcgcccgcgaagtcggc
accgatggccggctcggcggccaggccgtcgttcccggcgttgccggcacctggaaggac
ctgaccgacaacgtcaacttgctcgccgcaaacctgacgacccaggtgcgcaacattgcc
gaagtgacgaccgccgtggcgcgcggcgacctctcgcggaagatcaccgtcgacgtgaag
ggcgaaatcctcgagctgaagaacaccatcaataccatggtggaccagctgaacgccttc
gccggcgaagtgacgcgtgtggcccgcgaggtcggcacggaaggcaagctcggcggccag
gcgcaggtgccaggtgtcgcaggcacctggaaggacctgacggacaccgtcaacgtcatg
gccgccaacctgaccgagcaggtgcgcggcatcgtcaaggtcgtgaccgcggtggcgaac
ggagacctcaagcagaacctcaccgtcgcctccaagggcgaagtcgccgcactcgccgaa
accatcaacaacatgaccaatacgcttgccaccttcgccgaccaggtgaccacggtggcg
cgcgaggtaggcgtggagggccgcctcggcggccaggcgaacgtgccgggtaccgccggc
acctggaaggatctgaccggcaacgtcaacctgctcgccgccaacctgacgacgcaggtg
cgcgccatcgccgaggtggcgaccgccgtcaccaagggcgacctgacgcgttcgatcaag
gtcgatgcgcgcggtgaagtggccgagctcaaggacaacatcaatacgatgatcgacaac
ctgcggctcacgaccgagcgcaacaccgagcaggattggctgaagacgaacctcgcgcgc
ttcaccaacatgttgcaggggcagcgcgacctgacgctggtcggcaagatgctgctgtcg
gagctggcgccgctggtcggcgcccatcagggcgtcatctaccaggtggatgccgacgag
aaccaaccgttcctctcgctgctgtcggtctatgcgcaagggggcgaggcggcgcatccg
ccccggctcgactttggccagggcctcgtcggccagtgcgccagcgatgcccgccgcatc
ctcgtgaccgatctgcccgagaatgtcgttccgatcagctccggcgtgttcacgaccctg
ccgagaagtgcgatcgtgctgccggtgcatttcgagggccaggtgaaagcggtgatcgag
ctcgcctccgccggtgaattcaccgagctgcagctctccttcctcgaccaactgacgaca
tcgatcggcatcgttcttaactcgatcgaagcaaccatgcagaccgaaggcctgctcaag
cagtcccagcagctcgccgccgagctgcagacgcagcagcgcgaactgcagcagaccaac
gaacaactcgggcagaaggcgcagcagctcgaggaacgcaacgtcgaagtcgaggcgaaa
aaccaggagatcgaacaggcgcggcgcgcgctggaagaaaaggcggccgaactggcgctg
acctcgaaatacaaatccgagttcctcgccaacatgtcgcacgagctgcgcacgcctttg
aattcgatcctcatcctcggtcaacagctcggagaaaatccggacggcaatctgtcgggc
aaacaggtcgaattcgccaagaccatccacggcgccggcaccgatctgctcaacctcatc
agcgacatcctcgatctctccaaaatcgagtccggaacggtctcggtcgatgccgaggag
atcttcgtcagcaacctgctcgaagtgatggcgcggccgttccggcacgaagcggaaaca
cggaacctgtcttttgcggtcgaggtcggcgcagacgttgcgaagagcatcattaccgac
tccaagcggctccagcagatcctcaagaacctgttgtcgaacgccttcaagttcacggcg
cagggcggcgtgacactgcgcgttgcatcggcaacaggcggctggtcgtcggatcaccct
tcgcttcggcacgcgccgtcggtgatcgcctttgaggtcgtcgataccggcatcggtatt
ccgccggaaaaacaacgcatcatcttcgaggcgttccagcaggcggatgcctcgacgagc
cgcaaatacggcggcaccggcctcggattggcgatcagccgcgaactggcaaacctgctc
ggcggcgagatccagctgcggagcacgcccggcgtcggcagcaccttcgttctttacctg
ccgctgacctacgtcggtgccggtgcggttgcacccaggccggttccggcgccggcgaat
gtcgtggaattcgccgaggcggcggcaagccgccgcgccgagaagcccgccgaacatgtg
gcggacgaccgtaaccggctagaggccggcgactccgtgctgctcgtcgtcgaggacgat
gcgcattacgcccgtgtgctggtcgatctcgcccgcgacaacgggttcaaggtgctggtg
gcgatgcgcggcagcgatgcgctgacgctcgcgcaggaatacaagccgtcggcgatctcg
ctcgatattttcctgcccgatatgctcggctggacggtgctgagccagctcaagcagaac
ccacagacgcggcatattccggtgcagatcatcagtctggacgaggatcgacagcatgga
cttacgcgcggcgctttcgccttcatgagcaagccgacgacgccggaaggcctcggcaag
gcgctgtcgcgcctgaaggcctatgccgagccgcgtcgcaagcagttgctgctcgtggag
gacgacgaggcggagcggttgagcgtcactgcgcttctcggacatgacgacatcgacatc
accagcgtcggctccggatccgaagcccttgccgcattgcgacgcaatacccctgattgt
gtggtgctcgatctctctcttcccgatatgtcgggtttcgaagtgctggagcagatacgc
gacgacctcgaaatcggcgaggtgccggtggtcgtcttcaccggcagggagctctctgcg
gaagaggacgcgacgctccacagcatggctcgcagcgtcgtcgtcaagggtgtggagtcg
cccgagcggcttctcgatgagaccgcactcttcctgcaccgggtcgtcgccgatctgccg
gcggcaaagcaggctacgttgcaggaactgcacagttcggacgaggatctcgtcggcgag
accgtactgctcgtcgacgacgacgcccgcaacatcttcgcactcagcagcgtgctggag
cgccgcggcatgcgggttttgacagcgacgaccggcagcgaagccatcgacgtcatcaac
aacgaaccctcggttgccatcgtgctgatggacatcatgatgcccggcatggatggctac
gagacgatgcaggtcatccgctcggagctccgcttccggcggctgccgatcctggcgcta
accgccaaggccatgaagggcgaccgcgagaaatgcctggaggcgggcgcctcggattac
ctggcgaagcccgtcaacacagagcaactgctgtcggctctgcgcatgtggctgcaccgc
tga
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