Rhizobium binae: J2J99_27725
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Entry
J2J99_27725 CDS
T07180
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rbq
Rhizobium binae
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbq03032
]
J2J99_27725
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_27725
Enzymes [BR:
rbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J2J99_27725
DNA replication proteins [BR:
rbq03032
]
Prokaryotic type
DNA Topoisomerases
J2J99_27725
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J2J99_27725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACT
Motif
Other DBs
NCBI-ProteinID:
QSY85802
LinkDB
All DBs
Position
p3:181725..182732
Genome browser
AA seq
335 aa
AA seq
DB search
MNAEVITELGLIYVSDSEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFYQLIEFGQALPKIRRTVLRHL
DTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEISDLPGRQLFVWKDESGALKPVDSGRLNAYLAEISGIPI
SAKTFRTWAGSLAAFGVARERIAGGGRPTVKEMSEAAAEALHNTPAISRSSYIHPAIIGL
AGNDHALIEGGNEPLRGLRAEENRLLDFLTREIEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagtcatcaccgaacttggcctcatctatgtcagcgattccgaaccgggc
atccgcaggcgaaggaaaggcaagggcttcagctatgtcatgcctgacggcacgacgctt
tccgatgagttgcagcgggcgcgcatcggcgccctcggtctgccgccggcctatgagaat
gtctggatatgtctctacgagaacggtcatctgcaggcgaccggcatcgatgcgcgcggg
cgcaaacaatatcgctatcacaaggactggcaatcgttccgcagcgccgggaagttctac
cagctgatcgaattcggtcaggcactgccgaagatccgccgcaccgtgctgcgccatctc
gacaccggtgccgaggatgtcaacggcgtgttggcggctctgacgacgctgctcgacgag
gcgcatctgcgggtcggcaatcaagcctatgtccgggagaacggcacttatggcgcaacg
acgctgctgaagcggcatctgaaaatcgtcgacgggcggatcgagctgaagttccgcgcc
aagggcggcaagcgcgtccagcgcagtctcaagcatcccaggctgcagaaaatcctggaa
gagatttcggacttgcccgggcgccagctcttcgtctggaaggatgaaagcggtgcgctg
aaaccggtcgattccggccggctgaacgcctacctggcggagatatctggcattcccatt
tccgccaagacgttccgcacctgggccggatcgctggcggccttcggtgtcgcccgcgaa
cggatcgccggcggcggccggccgaccgtcaaggaaatgtcggaggctgcggccgaggcg
ctgcacaacacaccggcgatctcacgctcgagctacatccatccggcgatcatcgggctc
gccggcaatgaccatgctttgatcgaaggcggcaacgagccgctgcggggcttgcgggcg
gaagaaaacaggctacttgatttcctgacacgcgagatcgaggaatga
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