Rhizobium binae: J2J99_29650
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Entry
J2J99_29650 CDS
T07180
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rbq
Rhizobium binae
Pathway
rbq00730
Thiamine metabolism
rbq01100
Metabolic pathways
rbq01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J2J99_29650 (thiC)
Enzymes [BR:
rbq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J2J99_29650 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSY86065
LinkDB
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Position
p4:complement(92509..94335)
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AA seq
608 aa
AA seq
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MNIAAKNITPTVTTGPLPTSRKIYSRGDIHPDICVPMREISLHPTSGEPPVVVYDSSGPY
TIEGTEIRVEQGLPSLRRDWVLARGDVEAYKGRHVRPEDNGFASGERLTPEFPALRQPLR
AKDGSAVTQLSYARAGIVTPEMEFIAIRENLGRKAQEEAMVRDGESFGAHIPDHVTAEFV
RQEVAAGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAITSSMAEEVEKMLWAARWG
ADTVMDLSTGRNIHNIREWIIRNSPLPIGTVPLYQALEKVEGIAENLTWEVYRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAKDCQVMIEGPGHVPMHKI
KENMDKQLKVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKVGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFGWEDQFNLSLDPETAR
SFHDETLPKEAQKVTHFCSMCGPKFCSMRISHDIRAEAQKEGLDAMAARYREGGDLYMPV
QTLQHSGE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcgccgcaaagaatatcaccccaaccgtcaccaccggccccttgccgacatcc
aggaagatctacagtcggggggacatccatcccgacatttgcgtgccgatgcgcgaaatc
agccttcatccgacatcgggcgagccgcccgttgtcgtctacgactcgtccggcccctat
acgatcgagggcaccgagatccgtgtcgaacaggggctgccctcactgcgacgtgactgg
gttctcgcccgcggcgacgtcgaggcctataagggccgccatgtccgtcccgaagacaac
ggctttgccagcggcgaaaggctgacgcccgaattccccgcgctacgccagccgctgcgc
gcaaaggatggcagtgcagtcacccagctctcttatgcgcgcgccggcatcgtcacgccc
gagatggaattcatagccatccgcgaaaacctcggccgcaaggcgcaggaggaggcaatg
gttcgagacggcgagagcttcggcgctcatattccggaccatgtgacggcggaattcgtc
cggcaggaagtggcggcgggacgagcgatcatccccgccaacatcaatcatcccgaagcc
gagccgatgatcatcggccgcaatttcctggtgaagatcaacgccaatatcggcaattcg
gccatcacgtcgtcgatggccgaagaggtcgagaagatgctctgggcggcgcgctggggt
gccgacaccgtcatggacctttccaccggccgcaacattcacaacatccgcgaatggatc
atccgcaattcgccgctaccaatcggtaccgtgccgctctaccaggcgctggagaaggtc
gagggcattgccgagaacctgacctgggaggtgtatcgcgacacgctgatcgagcaggcc
gaacagggcgtcgactatttcaccatccatgccggcgtgcggcttcactacatcccgctc
accgtcaaccgcgtcaccggcatcgtctcgcgcggcggctcgatcatggccaagtggtgt
ctccatcatcatcgcgagagcttcctctacgagcatttcgaggagatctgcgatatctgc
cgcgcctatgacgtttccttctcgctcggcgacggcctgcgtcctggctccatcgccgat
gccaacgatgcagcgcaattcgccgaactggaaacactgggagagttgaccaagatcgcc
tgggcgaaagactgccaggtgatgatcgaaggccccggccatgtgccgatgcacaagatc
aaggaaaacatggacaagcagctcaaggtctgcggcgaggcgcccttctatacgcttgga
ccgctgacgacggatatcgcaccgggttacgatcacatcacctccggcatcggcgcagca
atgatcggctggttcggtacggcgatgctctgctacgtcacgcccaaggagcacctgggg
cttcccgaccgcaacgacgtgaaggtaggcgtcatcacctacaagatcgcggcccacgcg
gctgatctcgccaaggggcatccggcagcacagctgcgcgatgacgcgctctcgcgtgcc
cgtttcgaattcggctgggaggatcagttcaacctctcgctggaccccgaaaccgcccgc
agcttccacgacgagacgttgccgaaggaagcccaaaaggtgacccatttctgctccatg
tgcggcccgaaattctgctccatgcggatttcgcacgatatccgcgccgaagcgcagaag
gaggggctagacgcgatggcagcgcgttatcgcgagggcggcgacctctatatgccagtt
caaaccctgcaacattcgggcgaatga
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