Raja brachyura (blonde ray): 145375559
Help
Entry
145375559 CDS
T12046
Symbol
sall1a
Name
(RefSeq) sal-like protein 1a
KO
K19871
sal-like protein
Organism
rbra Raja brachyura (blonde ray)
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbra03000
]
145375559 (sall1a)
03036 Chromosome and associated proteins [BR:
rbra03036
]
145375559 (sall1a)
Transcription factors [BR:
rbra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
145375559 (sall1a)
Chromosome and associated proteins [BR:
rbra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
145375559 (sall1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
Teflon_C
zf-C2H2_2
IZUMO
zf-Di19
zf-H2C2_5
UBZ_FAAP20
TAFH
Motif
Other DBs
NCBI-GeneID:
145375559
NCBI-ProteinID:
XP_080093553
LinkDB
All DBs
Position
17:complement(6525929..6546702)
Genome browser
AA seq
1361 aa
AA seq
DB search
MINRNALLIIIIIPAHMRTVGARVNFRNFATPEFVFFYSLADVSTNMSRRKQAKPQHFKS
DLDPALSGENGTSLGGHVERHAKNGDAHVCGHCCAEFFELPDFLHHKKNCTKKQLVLIVN
ENPAAPSQAPSPQSPAHPVEEANEGTDNASLVDCDELVESRELDREVFMEVDTSNSNVSS
TNSNNHSNNTCSDYPTMGSSAVATPLPHIGDITALGNFSMLNSNVIIENLRSTKVAVAQF
SQETRTNSSSSSKIAVPALMEQLLALQHQQIHQLQLIEQIRQQIILLASRNGDSPSVNSS
PGTLGAAVNPLTTLSSHLSQQLAAAAGLAQSLASQSASISGGNRVHLPQSSPGSGAPQPS
SPSPQADAAPSLPSTAAQPSESASAGAPAVCGSRLASPSVPAAPAPAALGIGGLLGPLST
LSASLLPQSSAPAPPFSSPLSGIEATSGNLGSLAALAGPRKGKPPNVVVFEAKTSSDESF
FKHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNICGNRFSTKGNLKVHFQRHREKYPHI
HMNPYPVPEHLDNVPTNTGIPYGMSVPPEKPITSWLDSKPLLPTLTTSVGLPLPSTISGL
SAIIKSEECPPIPVNQSPCSPPGSVRSDLAGTEPSVKSVRDLEEVEDNGSPTSNDKPDDR
AQPLQPTASVAVPASSSASDSGLSTASAFTTPLAPLVCEQFKSQFPFGGLLDSLQTSETS
KLQQLVENIDRKMADPNQCVICHRVLSCHSALKMHYRTHTGERPFKCKVCGRAFTTKGNL
KTHYGVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVADNYPESMESD
TTTSFEDKNFDDMDDYSDENMEDCPDSSVPDTPRSAEVSRGSLTPSPLPPEMSSIAALEH
QMKMINAGLVEQLQASLRSVENGLADGDQMTSDSFSMVGDVESQSIGSPAISESTSSLHA
PSPSNSNADSRRSKSPGSEERQHNRSLLSDASNSVSPATTNGGALDLTSCNAERAAKDDA
LSLLFPGRDRGKLRNTSCDICGKAFACQSALDIHYRSHTKERPYICTVCNRGFSTKGNLK
QHMLTHQMRDLPAQLFEPNNSTLAPAANHGSTNPPALTLTSLIKTEVNGFTHGCSLDCKD
PPASLIPSGPLSASSVSPVLSAQQRRTPKQHYCTACGKTFSSSSALQIHERTHTGEKPFA
CTICGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGPMAFLGGNPIKFTEMLQKDLAV
RARDGDPSSFWNQYAAALTNGLAMKTNEISVIQNGGLPPNAASLGNGGSSPIGGLTGSLD
KLHSTVAGTPLAGLEKISATENGTNHRFTHLVGENKEMVSS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcgcaatgcattattgataatcataattatacccgcacacatgcgcactgtc
ggcgccagggtcaatttccgtaattttgcaactccagaatttgtatttttttattcgctt
gctgatgtatcaaccaacatgtcgcgtcggaagcaggcgaagccgcaacacttcaagtcg
gacctggatccagcattgtctggagagaatggaacgtcactgggcggccacgtggagcgg
cacgccaagaatggggatgctcacgtctgtggccactgctgtgcagagttcttcgagctg
cccgatttcctccatcacaagaagaattgcactaagaaacaactggttctgattgtaaat
gaaaatccagccgccccttcgcaagcgccctctccacaatctcccgcccaccccgtcgaa
gaggcgaacgagggaacggataacgcgagtctcgtggactgcgatgagcttgtagagagt
agggaacttgaccgggaagtattcatggaggtggacactagcaacagtaatgtcagcagt
actaacagtaataaccatagtaataatacatgcagtgattatcccacaatgggaagctca
gctgtcgcaacacctctacctcatataggtgatataacagctctgggaaacttctcgatg
ttgaatagtaatgtgatcattgaaaatcttcgaagtacaaaagtggcagtggcccaattc
tcccaggaaaccagaactaacagttcgtcaagtagtaagatcgcagttccagcactaatg
gaacagctcctggctctccaacatcaacagatccaccagctgcagcttattgaacaaatc
cgtcaacagataatcttgttggcttcccgcaacggtgactccccttcggtcaactcttcc
ccaggtactttgggagctgctgttaatccattgactacgcttagttcgcatctatctcag
caacttgctgctgcagctggacttgcccagagccttgccagtcagtctgccagcatcagt
ggtgggaatcgagtacatctacctcagagcagtcctggaagcggagccccccagcccagc
agtccttccccgcaagccgacgccgccccttccttgccgagcaccgctgcccagccctcc
gagagcgcgtccgcgggcgcccccgccgtctgcggctcccgtctcgccagcccctccgtc
cccgcggcgcctgcgcccgccgccctggggatcggcggcctgctcggcccgctgtccacg
ctgtccgcctcactgctacctcagtcctccgcgcctgcccccccgttttccagccctctc
tcaggcatcgaggcgacttcagggaacctgggctcgctggccgccctagcgggcccgcgg
aagggcaagccccccaacgtggtggtgtttgaggcgaagaccagctccgacgagtctttc
ttcaagcacaagtgtcgcttctgtgctaaagtctttggaagcgacagtgccttgcagatc
cacctgcgctcgcacactggcgagaggccctacaagtgcaacatttgtggcaaccgattc
tccacgaaaggcaacctgaaggttcacttccagagacaccgggaaaagtacccacacatt
cacatgaacccctatcccgtccccgaacacttggacaacgtcccgaccaacacggggatc
ccctatgggatgtctgtcccccccgagaaaccaataaccagttggctggacagcaagccc
ttgttaccgacactgaccacatctgtcggcctgcctctcccttccactatatcaggtttg
tccgccatcatcaaatcggaggagtgtccgcccatcccggtcaatcagtctccttgcagc
ccgcccgggtcggtccggagcgacttggccggcaccgaaccctctgtgaaaagcgtccgt
gatttggaagaggtggaagataacggctcacctacctcaaacgacaaacccgatgatcgc
gcacaacctctccagcccaccgccagcgtggccgtccccgccagctcgagcgcctccgat
tcgggactgagcaccgcttctgctttcaccacgccgctcgccccgctcgtctgcgagcag
ttcaagtcgcagtttccattcggcggcctcctggattccttgcagacgtcggagacgtcc
aaactgcagcagctggtggagaacatcgaccgcaagatggcggaccccaaccagtgcgtc
atctgccaccgggtcctgagctgccacagcgctctgaagatgcactaccgcacccacacc
ggcgagcggcccttcaagtgcaaggtgtgtggccgcgccttcaccaccaagggcaacctg
aagacccactacggcgtccaccgcgccatgccgccgctgcgcgtccagcattcctgccct
atctgccagaagaagttcaccaacgctgtggtcctgcagcagcacatccggatgcacatg
ggaggccagatccccaacacccccgtggcggacaactaccccgagtcgatggagtcagac
accaccacgtcctttgaggacaagaatttcgatgacatggacgactactctgacgagaac
atggaggactgcccggatagcagcgtcccggacacgcccaggtccgcggaggtttctcga
ggcagtctcaccccgtcccccttgcccccggaaatgtccagcatcgcggcgctggagcac
cagatgaagatgatcaacgccggcctggtggagcagctccaagcgagcctccgctcggtg
gagaatggattggccgacggcgaccaaatgaccagtgactccttctcgatggttggggac
gtggagagccaaagtattggaagtcctgccatttcagaatctacctcttccttgcatgct
ccatccccgagcaacagcaacgccgacagccgcaggtccaagtctcccggcagcgaagag
aggcagcacaacaggtctctgctgtcggacgcgtccaattcggtgtcccccgcgaccacc
aacggcggcgccttggacctgacctcctgcaacgccgagcgggcggcgaaggatgacgct
ctgagcctgctgtttcccggtcgtgaccgcggcaagttgaggaacacgtcgtgtgatatc
tgtggcaaagcctttgcttgccagagtgccttggacattcactacagaagccataccaaa
gagcgtccatacatttgcacagtatgcaatcgcggtttctccaccaagggcaatttgaag
cagcacatgttgacgcaccagatgcgggacctcccggctcagctgttcgagcccaacaac
tccaccctggctcccgctgctaaccatggctccacgaacccgcccgccctaacgttgacg
tccttaatcaaaaccgaggtcaatggtttcacgcacgggtgttccctggactgcaaggac
ccacccgctagccttatcccatccgggccgctgtctgcgtcctctgtctcgcccgtcctg
tcagcgcagcagaggagaactccaaagcagcattactgcacggcttgcggcaaaaccttc
tcctcgtccagcgctctccaaatacacgagaggacacacacgggggagaaaccgtttgcc
tgtaccatatgtggcagggccttcaccaccaaaggcaatctgaaggttcacatggggacc
cacatgtggaacagtgctcccgcaaggcgagggaggcgactttcagtggatggtcccatg
gcttttctgggcggcaatcctattaaattcaccgaaatgctccagaaggatttagcggtg
agggctcgagacggagacccttcgtcgttttggaaccagtacgcggcggcactgacgaat
ggcttggcgatgaagactaatgagatatccgtgattcagaacggcgggctccccccgaac
gctgccagtctgggcaacggcggcagttcgcccatcggtggtttaacggggagcttggac
aaacttcacagtactgtcgcaggcacacctctagctggtctggagaagatatcagccact
gaaaatggaaccaaccacagattcacccatttggtgggggaaaacaaagaaatggtatcg
agctaa
DBGET
integrated database retrieval system
