Raja brachyura (blonde ray): 145380713
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Entry
145380713 CDS
T12046
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
rbra Raja brachyura (blonde ray)
Pathway
rbra03030
DNA replication
rbra03410
Base excision repair
rbra03420
Nucleotide excision repair
rbra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145380713 (rfc2)
03410 Base excision repair
145380713 (rfc2)
03420 Nucleotide excision repair
145380713 (rfc2)
03430 Mismatch repair
145380713 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbra03032
]
145380713 (rfc2)
03036 Chromosome and associated proteins [BR:
rbra03036
]
145380713 (rfc2)
03400 DNA repair and recombination proteins [BR:
rbra03400
]
145380713 (rfc2)
DNA replication proteins [BR:
rbra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145380713 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
145380713 (rfc2)
Chromosome and associated proteins [BR:
rbra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145380713 (rfc2)
DNA repair and recombination proteins [BR:
rbra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145380713 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
145380713 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_16
AAA_14
Mg_chelatase
Viral_helicase1
Rad17
AAA_11
AAA_assoc_2
RuvB_N
DNAX_ATPase_lid
nSTAND3
MipZ
AAA_19
AAA_24
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
NTPase_1
AAA_30
RNA_helicase
MeaB
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
145380713
NCBI-ProteinID:
XP_080101750
LinkDB
All DBs
Position
27:complement(19749248..19789314)
Genome browser
AA seq
352 aa
AA seq
DB search
METAGGADPEPAESEGPSGGAAGPSASSAPTYELPWVEKYRPLKLNEVVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIFSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQVLTRLMQVVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSG
FEFVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRV
CKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQKTAAPPAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcgggcggcgcggacccggagccagcagagtccgaggggccgagcggcggt
gccgcgggaccgagcgcatcatctgcgcccacgtacgagctaccctgggttgagaagtac
agacctttgaaactgaatgaagttgtcgggaatgaagaaacagtcagtcgactggaggtc
ttcgcaagagaaggaaatgtaccaaacatcattattgcaggccctcctgggactggaaaa
acaaccagcatcttgtgcttggctcgagcacttttgggtcctgcactaaaggatgctgtt
ctggaactcaatgcttcaaatgaccgaggtattgatgtggttagaaacaaaattaaaatg
tttgcccagcagaaggttacattaccaaaaggtcgtcacaagatcatcatcctggatgaa
gcagacagtatgacagatggagcccaacaagccctaaggaggacaatggagattttctct
aaaaccacacgttttgcactggcatgcaatgcttcagataaaatcatagaacctatccag
tctcgttgtgctgttctacgttacacaaagcttactgatgcccaggtccttacacgacta
atgcaggtggttgagaaggagaatgtccaatacacagatgatggattagaagctatcatc
ttcacagcccaaggagacatgagacaggctttgaacaacttacagtcaacgcattcagga
tttgagtttgtgaacagtgacaatgttttcaaggtgtgcgatgaacctcatcctctcctg
gtaaaagaaatgattcagcactgtgttaatgcaaacattgatgaagcatataaggttgtt
gctcatctttggaaattgggctattcacctgaggacatcattggcaacattttcagagtc
tgtaaaacgttccagatgcaggagtacctgaaactggaatttataaaggagattggatac
actcacatgaggattgcagaaggagtgaattccttgctacaaatggctgggttactcgct
cgactttgtcaaaagactgcagctccacctgcaagttga
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