KEGG   Raja brachyura (blonde ray): 145380713
Entry
145380713         CDS       T12046                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
rbra  Raja brachyura (blonde ray)
Pathway
rbra03030  DNA replication
rbra03410  Base excision repair
rbra03420  Nucleotide excision repair
rbra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rbra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    145380713 (rfc2)
   03410 Base excision repair
    145380713 (rfc2)
   03420 Nucleotide excision repair
    145380713 (rfc2)
   03430 Mismatch repair
    145380713 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbra03032]
    145380713 (rfc2)
   03036 Chromosome and associated proteins [BR:rbra03036]
    145380713 (rfc2)
   03400 DNA repair and recombination proteins [BR:rbra03400]
    145380713 (rfc2)
DNA replication proteins [BR:rbra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    145380713 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    145380713 (rfc2)
Chromosome and associated proteins [BR:rbra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    145380713 (rfc2)
DNA repair and recombination proteins [BR:rbra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     145380713 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    145380713 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 nSTAND_NTPase5 AAA_16 AAA_14 Mg_chelatase Viral_helicase1 Rad17 AAA_11 AAA_assoc_2 RuvB_N DNAX_ATPase_lid nSTAND3 MipZ AAA_19 AAA_24 AAA_18 AAA_5 AAA_28 ABC_tran AAA_25 AAA_23 NTPase_1 AAA_30 RNA_helicase MeaB SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 145380713
NCBI-ProteinID: XP_080101750
LinkDB
Position
27:complement(19749248..19789314)
AA seq 352 aa
METAGGADPEPAESEGPSGGAAGPSASSAPTYELPWVEKYRPLKLNEVVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIFSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQVLTRLMQVVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSG
FEFVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRV
CKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQKTAAPPAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggagacggcgggcggcgcggacccggagccagcagagtccgaggggccgagcggcggt
gccgcgggaccgagcgcatcatctgcgcccacgtacgagctaccctgggttgagaagtac
agacctttgaaactgaatgaagttgtcgggaatgaagaaacagtcagtcgactggaggtc
ttcgcaagagaaggaaatgtaccaaacatcattattgcaggccctcctgggactggaaaa
acaaccagcatcttgtgcttggctcgagcacttttgggtcctgcactaaaggatgctgtt
ctggaactcaatgcttcaaatgaccgaggtattgatgtggttagaaacaaaattaaaatg
tttgcccagcagaaggttacattaccaaaaggtcgtcacaagatcatcatcctggatgaa
gcagacagtatgacagatggagcccaacaagccctaaggaggacaatggagattttctct
aaaaccacacgttttgcactggcatgcaatgcttcagataaaatcatagaacctatccag
tctcgttgtgctgttctacgttacacaaagcttactgatgcccaggtccttacacgacta
atgcaggtggttgagaaggagaatgtccaatacacagatgatggattagaagctatcatc
ttcacagcccaaggagacatgagacaggctttgaacaacttacagtcaacgcattcagga
tttgagtttgtgaacagtgacaatgttttcaaggtgtgcgatgaacctcatcctctcctg
gtaaaagaaatgattcagcactgtgttaatgcaaacattgatgaagcatataaggttgtt
gctcatctttggaaattgggctattcacctgaggacatcattggcaacattttcagagtc
tgtaaaacgttccagatgcaggagtacctgaaactggaatttataaaggagattggatac
actcacatgaggattgcagaaggagtgaattccttgctacaaatggctgggttactcgct
cgactttgtcaaaagactgcagctccacctgcaagttga

DBGET integrated database retrieval system