Raja brachyura (blonde ray): 145381100
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Entry
145381100 CDS
T12046
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rbra Raja brachyura (blonde ray)
Pathway
rbra03440
Homologous recombination
rbra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
145381100 (top3b)
03460 Fanconi anemia pathway
145381100 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbra03032
]
145381100 (top3b)
03400 DNA repair and recombination proteins [BR:
rbra03400
]
145381100 (top3b)
Enzymes [BR:
rbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
145381100 (top3b)
DNA replication proteins [BR:
rbra03032
]
Eukaryotic type
DNA Topoisomerases
145381100 (top3b)
DNA repair and recombination proteins [BR:
rbra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
145381100 (top3b)
FA (Fanconi anemia) pathway
145381100 (top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
145381100
NCBI-ProteinID:
XP_080102362
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All DBs
Position
28:complement(13688031..13717801)
Genome browser
AA seq
863 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGNLNSRKGLNGVCSVHEYAGTFLRQNVRFKVTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEGRGIDYIVLWLDCDK
EGENICFEVLDAIKPVMNIPRGNERVVYRAKFSAITDTDISKAMNQLGEPNRNEALSVDA
RQELDLRVGCAFTRFQTKYFQGKYGNLDSSLVSFGPCQTPTLGFCVERHDKIQSFKPEAY
WVLQAKVTNSAGDSMVLDWDRVRVFDREIAQMYLNMTKSTKETKVQSVSKKEKVKQRPQA
LNTVEMLRVASSALGMGPQHTMQIAEKLYTQGYISYPRTETTQYPESFDLKATLRQQANN
IYWSDVVKALLTEGINRPRKGQDVGDHPPITPMRSATEAELGSDGWRLYEYITRHFIATI
SYDCKYLQTTVAFNIDEEHFTCTGKTLLSAGYTTVMPWQSLADEETLPVCEGGDVFNVNE
VKLLEKQTSPPDYLTESELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDQELVLPTIRSAVEKQLGLIAAGKADFPPVLEHALNIFKRKFHFFVDSI
AGMDELMEVSFSPIAESGKPLSRCGKCHRFMKYIQAKPSRMHCSHCDDTYNLPQNGTIKL
YKELRCPLDEFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSL
LGIVQCLECESGVLVFDPTSGPKWKMACNSCNVVVHFFENAHRVKVSSETCVCEAAIVDV
DFNKAKSPLPGEATQHSGCVFCDPVFQNLVELQYAKMKHPMHRGGGGQGRRRGRGRGRGR
RPPGRGNPKKPKDKMAALAAYFV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgctgatggtggcggagaagccgtcccttgctcaatccattgccaagatc
ctgtcgcggggtaacttgaactcgcggaaaggtttgaatggagtatgctccgtgcacgag
tacgctgggaccttcctgcggcagaatgtccgattcaaggtgacgtcggtctgcggtcat
gtgatgaccttggatttcataggaaaatataataattgggacaaagttgatccagcagag
cttttcagcaaagcaccaacagaaaagaaggaagctaaccccaaactcaatatggtgaag
tttttacaggtggaagggcgaggcattgactacattgttctctggctggattgtgacaag
gaaggagaaaacatctgctttgaggtactggatgccattaaacccgttatgaacattcct
cgtggaaatgaaagggtggtttatcgtgcaaagttcagtgctataacggatactgacatt
agcaaggccatgaaccaattgggcgagcctaatcggaatgaagcactctcagttgatgca
cgtcaggagcttgatttgagagtgggttgtgcttttacaaggtttcagaccaaatatttt
cagggtaaatatgggaatttggatagttccctcgtctcattcggtccctgccagacaccc
actcttggtttctgtgtggagagacatgacaagatccaatctttcaagcctgaggcttac
tgggtcctgcaagcaaaggtcactaattctgcgggtgattccatggttctcgactgggac
agagtcagagtttttgatcgagaaatagcacagatgtatctgaatatgacaaagtccaca
aaagaaacaaaggtgcaatctgtcagtaaaaaggagaaggtgaagcagagaccacaggcc
ctgaacactgtggagatgttacgtgtagcaagctctgcactggggatgggcccacagcat
accatgcaaatagctgagaaactctacactcaaggatacatcagttaccctcgaacagag
accacacaatatccagaaagcttcgacctcaaagcaaccctccgacagcaagcaaataac
atctactggagtgacgtggtgaaggctttacttactgaaggcattaatcgtcctcggaag
ggtcaggacgttggtgatcatccacccatcaccccaatgcgttcagctacagaagctgaa
ttgggtagtgatggctggaggctttatgagtatatcaccaggcacttcattgctacaatc
agctatgactgcaaatacctccaaaccacagtcgctttcaatattgatgaggaacatttt
acttgtacagggaagactttactttcagctggttacactacagtgatgccatggcagagc
ctagcagatgaggagacccttccagtctgcgagggaggtgatgtgtttaatgtcaatgag
gtcaagttgctggagaaacagacaagtccacctgattacctaacagagtcagaactcatc
actttaatggaaaaacacggcattgggacagatgccagcatccctgtccacatcaacaac
atctgtcaacgcaactatgttactgtggagagtggccgcagattgaaacccactaacctt
gggattgtccttgttcatggatattacaaaattgaccaggagcttgtccttcccaccatc
cgcagtgctgttgagaaacagcttggtctcattgcagcaggcaaggccgatttcccccca
gtcctggagcatgctctgaatatcttcaaacggaagttccacttctttgtggactccata
gcaggcatggatgaattaatggaggtgtcattttctcccattgctgaatcggggaagcct
ctgtcccgttgtggcaagtgccatcgattcatgaagtatattcaggccaaaccaagccgg
atgcattgttcccattgtgacgatacctacaacttaccccagaatggaactatcaagctc
tataaagagctccgctgtccgctcgatgagtttgaactggttctctggtcgtctggttcc
agagggaaaagctatcctctgtgtccgtattgttacaaccacccaccattccgtgatatg
aagaaaggaatgggatgtaatgaatgcacccatccgacctgtcagcattcattgagcctg
ctgggaatcgtccagtgtcttgaatgtgagagtggtgtgctggtctttgaccccacctca
ggacccaaatggaagatggcttgtaacagttgcaatgtggtcgtgcacttctttgaaaat
gcccacagagtgaaagtatcatctgaaacctgtgtatgtgaggcagcgatcgttgatgtg
gacttcaacaaagcaaaatcccctctgcctggtgaagcaacacagcactcgggctgtgtc
ttctgcgacccagtgtttcaaaaccttgtggaacttcagtatgccaaaatgaagcaccca
atgcacagaggtggtggaggacagggacgaagacggggacggggaagaggcagggggcgt
agacctccaggcaggggcaatccaaagaaacccaaagacaaaatggctgcactagcggct
tattttgtgtag
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