Raja brachyura (blonde ray): 145381445
Help
Entry
145381445 CDS
T12046
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
rbra Raja brachyura (blonde ray)
Pathway
rbra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
145381445 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rbra04121
]
145381445 (ube3b)
Enzymes [BR:
rbra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
145381445 (ube3b)
Ubiquitin system [BR:
rbra04121
]
Ubiquitin ligases (E3)
HECT type E3
145381445 (ube3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
145381445
NCBI-ProteinID:
XP_080102961
LinkDB
All DBs
Position
28:5824611..5893668
Genome browser
AA seq
1079 aa
AA seq
DB search
MCVRHQGARMFSMIQTSKTEFLDMARAAREERKGQKERERATIVIQAVVRRYLCRCRLLR
EIRLEIDDFFDVSESVSSKRSALVVFKIARKLLFIFHVKEDKERLQKLCNCILNSMEVEN
EPKVWYVSIALSKDLTLLWIKQVKDLLWICCVFLKRLKPDILQDAKFITLYLTVLITFTD
ASNWKILKGKGEALRPAMNHICANIMGHLNQKGYYTVLQILLTNGLARSKPSLSKATLTA
IFTLALRPVIAAHFSDNLLRSFLLHIMSVPALVTHLSTIVPECMSMVHSHELLRKFILFL
SRDEQCDDICVCLEGSHTLCLLGNLIYLAYLSEKVLEEETSHFISVLTAMLSYCQKYVSQ
KKSNLTHWHPVLGWFSQTVDYGMNEAMPLVTRQLQYLWSVRVIRMLFQDVLSKKLTELQD
MVHSYAQSSSSSNNIQVKNLFKRAFQKSASMRNILKPVGGKRVDSPEVQKVCSICVLYQT
ALTTLTQIRLQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAML
MLFCDCSRHLITILDEIEVYEEQVSFKLEELVTISSFLNSFVFKMIWDGIQESASGEQLE
LFHAVHGWLMTLYERDCRRRFAPDDHWLRKDLKPSLIFQDLDKGKKRAQLLLQYIPHTIP
HKNRVLLFRNMVTKEKGTLGLVETSSASPHVIHVTIRRSRMLEDGYEQLRRLPVNTMKGV
IRVKFMNDLGVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHE
NHLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQVLGHHHSALYSSIDELPSLDAEFYKN
LTSIKRYDGDIGDLGLTLSYDEDVMGQLVCHELIPGGKTIGVTNENKISYIHLMAHFRMH
TQVKDQTVAFIRGFRSIINPEWLRMFSTPEVQRLIAGDNAEIDLEDLKKHTVYYGGFHGS
HRVIAWLWDILAHDFTAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGD
TLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgagacaccaaggagcaagaatgtttagcatgatacaaacctccaagaccgag
ttcctggacatggctcgggctgctcgggaggagaggaaagggcagaaggaacgtgagcgg
gcaacgattgtgatccaagcggtggtcaggaggtacctctgcaggtgtcggctgctgaga
gaaatcagacttgaaatcgatgatttttttgacgtcagcgaatctgtttcatcaaagaga
agtgcgctcgttgtgttcaaaatcgcaaggaaattgctctttatatttcatgtgaaagaa
gataaagagagacttcagaagctgtgcaactgtatcttgaatagcatggaagtggagaat
gaacccaaggtatggtatgtctcaattgcactttccaaagatctcaccctgctatggatc
aaacaagtaaaagacctactctggatctgctgtgtatttctaaagcggctgaagccagat
attctgcaggacgctaagttcatcaccttgtatcttacggtgctgatcacattcacagac
gcttcaaactggaaaatactgaaggggaaaggcgaagcactgagacctgccatgaaccat
atttgtgcgaacatcatgggacatctcaatcaaaagggttattacaccgtgctacagata
ttgttaacgaatggattggcaagatccaaaccatctctgtccaaagccacattaacagcc
attttcacccttgcattacgaccagtgattgctgcacacttctcggataacctgctccgt
tccttcctgctgcacatcatgtcagtcccagcgctggtgacgcatctctccactatagta
cccgagtgcatgtccatggtccattcccacgagctgctgcgaaaattcatcctgttctta
agtcgagacgagcagtgcgatgatatctgtgtctgcttggaaggaagccatacactttgt
ttgctgggcaacctgatttatttggcctatctgtccgagaaggttttggaggaggagacg
agtcactttatcagtgtgctgactgctatgctgtcgtactgccagaaatatgtatctcag
aagaagtctaacctgacacactggcaccctgtactgggctggttctcacagactgttgac
tatgggatgaatgaagcaatgccactggtcaccaggcagttgcagtacctgtggagtgtg
cgggtcattcgcatgttgttccaagacgtgctgagcaaaaaattaactgagcttcaagac
atggtgcattcatatgctcaatcctccagctcttcaaataacattcaggtcaaaaatctc
ttcaaacgagcttttcaaaagtcggcgtccatgcgtaacattctgaagccggttggcggg
aagcgagtggactcccccgaggtgcagaaagtctgcagtatctgcgtgttgtatcagacg
gcattgactacactcacccagattcgactccagatcctcaccgggttaacctatttagac
gacttgttgcccaagctgtgggcgttcatttgtgagttggggccccaagggggcttgaag
ctattccttgaatgcctaaacaatgacaccgaggaatccaagcggcttcttgcaatgctg
atgctgttttgtgactgctctcggcaccttatcacgattctggatgaaatcgaggtgtat
gaagagcaagtatcatttaaactggaagagctggtcaccatctcctccttcctgaacagc
tttgtatttaaaatgatctgggatggcattcaggaaagtgcgagcggggagcaactggag
ctgttccacgctgtccatgggtggctgatgactctgtacgagcgggactgccgccgacgg
tttgccccggacgatcactggctgcgcaaggacttgaaacccagcttgatattccaggat
ttggataaagggaagaagcgagcccagttattattgcagtacatccctcacaccatccca
cacaagaatagagtgctgctgtttcggaatatggtgacgaaggagaaggggacattgggt
ttggtggagacgagctctgcatctcctcatgtcatccatgttaccatccgcagatcccgg
atgcttgaggacggatatgagcaactgcgccgattacctgttaacacaatgaaaggggtc
attcgagtgaaatttatgaatgatctcggagtagatgaggctggcattgatcaggacggt
gtcttcaaggaatttttagaagaaatcatcaagaaggtctttgacccagctctaaatctc
ttcaagacaaccagtggggatgagcgactgtacccatcccccacctcatacatccatgaa
aatcatctgcagctctttgaatttgtcggaaagatgctaggaaaagccgtctatgaggga
atagtggtggatgttccctttgcctccttcttcctcagtcaagtgcttggacatcatcac
agtgcattgtacagctcaattgatgaacttccatccctggacgccgagttctacaaaaac
ctcacctccataaagcgttacgatggtgacattggtgaccttggtttgacattatcttat
gatgaagacgttatgggtcagcttgtttgccatgagctgatcccaggaggaaaaaccata
ggggtaaccaatgaaaataaaatcagttacatccacctgatggcccacttccgcatgcac
actcaggttaaagaccagacggtggctttcatccgcggcttccgctccatcattaacccc
gagtggctccgtatgttttccacgcctgaagtgcagcgcctcattgcaggggacaacgcc
gagatcgacttggaggacctcaaaaagcacacggtgtattacggaggcttccatggcagt
caccgagtcattgcctggctctgggatattttagctcacgacttcacagcagaagaacga
gccatgtttcttaagtttgtcaccagctgctccagaccgccactcctgggctttgcttac
cttaaaccccccttctccattcggtgtgtggaggtttcagacgatcaggatacgggggat
acgctgggtagcgtgctgcgcggcttcttcaccatccgcaagaaggaacctggcggccgg
ctgccgacctcctcaacctgcttcaacctcctgaagcttcctaattacagcaagaagagc
atcttgagagagaaactccgctatgcaatcagtatgaacaccggatttgaactctcctaa
DBGET
integrated database retrieval system
