Raja brachyura (blonde ray): 145381799
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Entry
145381799 CDS
T12046
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
rbra
Raja brachyura (blonde ray)
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rbra04121
]
145381799 (wdtc1)
Ubiquitin system [BR:
rbra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
145381799 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
TPR_19
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
DSE1_N
TPR_11
Beta-prop_HPS5
TPR_2
PAC11
ANAPC3
TPR_1
TPR_16
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
TPR_17
Beta-prop_VPS8
Beta-prop_WDR41
TPR_BSK1_C
Beta-prop_WDR35_TULP_N
TPR_6
TPR_Slam
RMD1-3
CFAP70_TPR_C
Barstar
COMMD8_HN
CFAP70_mid_TPR
Motif
Other DBs
NCBI-GeneID:
145381799
NCBI-ProteinID:
XP_080103496
LinkDB
All DBs
Position
29:26684164..26724225
Genome browser
AA seq
671 aa
AA seq
DB search
MELFNVTRDLIQRQIKERNTLQFERRYHVIDPFIKRLGLECELEGHSGCVNCLEWNEKGD
LLASGSDDQHTILWDPFSCKKLLTMHTGHTANIFTVKFLPHSNDRTLITGAADSKVHVHD
LTVKETIHMFGEHTNRVKRIAAAPMWPNTFWSAAEDGTVRQYDLRESSKHSQILVDLTEY
CGQHVEAKCLAINPQNNNYLAVGASGPFVRVYDVRMIHNHRKAVKPSSAPGVHTFCDRYK
SVPDGAVQYYVAGHLPVKQPDYNNRLRVLVATYVAFNPDGTELLVNMGGEQVYLFDLTNK
QKPYTFLLPKKYHSNDLQNGKSMANGVTNGIHLHSNGFRLSEAWPQSSVPSELSPHLEKL
KQQANDAFSLQQWTQAIQLYSKAIQQAARNPMLYGNRAAAFMKRKWDGDHYDALRDCLKA
ISLNPSHLKAHFRLARCLFELKYVAEALECLDDFKGRFPEQAHSSACDALDRDIKAVLFA
KTDNSDEKKTGSTTPIRIRSSGRKDSISDDEVILRERGYDYKSRYCGHCNTTTDIKEANF
FGSNGQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPRHCFLATSGIDPVVR
LWSPRPETEDQNERVIEDMEGASQANQRRMNADPLEVMLLNMGYRITGLTNSGMASDDEE
STEGQVQCRPS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtttaatgtaaccagggacctcatccaacggcagataaaggagcggaacacg
ctgcaatttgaacgtcgataccatgtcattgatccgttcatcaagcgattgggcctggag
tgtgagcttgagggtcactctggctgcgtgaactgcctggaatggaatgaaaagggcgat
ttgctggcctctggatcagatgatcagcacaccattctgtgggatccttttagctgcaag
aaactgctgactatgcatactgggcacactgctaatatattcacagtgaagttccttcct
cactcgaatgatcgcacactgattaccggggctgctgattccaaggtgcatgtccacgac
ttgactgttaaggaaactattcatatgtttggcgagcacaccaatcgtgtgaagcgtatt
gcagcagctcccatgtggcccaacacgttctggagcgcagcagaagacggaacagtgaga
cagtatgatctaagggagagcagcaagcactcacagatattggtggatctcacagaatac
tgcggacaacatgtggaggctaagtgcctggccattaatcctcaaaacaacaactatctg
gctgtcggagcaagtggaccctttgtgcgtgtctatgacgttcgcatgattcacaatcac
agaaaagcagtaaaaccgagctcagcgcctggagtgcatacattctgtgacaggtacaaa
tctgtgccagatggagctgttcagtattatgtagcaggtcacctgccggtaaaacaaccg
gattataataatcgacttcgagtgctcgtggccacatatgtggccttcaatcctgatgga
actgagctcctggtcaacatgggaggagagcaggtttatttgtttgatctaacgaataag
caaaagccctacacattcttgctacccaagaagtaccattcaaatgatttacagaatgga
aaatcaatggctaatggagttacaaatggaatccaccttcacagtaatggcttcaggcta
tcagaggcatggccacaaagtagtgttccctctgaattgtcaccgcacttagagaagctc
aaacaacaagcaaacgatgccttctctctgcaacaatggacacaggctattcagctttat
agcaaggccattcagcaagcagccagaaaccccatgctttatggtaacagagccgcggcc
ttcatgaagcgcaaatgggatggagaccattatgatgctctcagggactgtctgaaagca
atttctttgaatccctcccacctgaaggcccatttccgcctggcacgttgtttgtttgag
ttgaagtatgttgctgaggctttggagtgccttgatgactttaagggccgttttcctgaa
caagcccatagcagtgcctgtgatgcactggaccgagacatcaaagcagtgctctttgca
aagactgataactctgatgagaaaaagacaggatctacaacaccaatccgtatccgatca
agtggcaggaaagattccatctctgatgatgaggtgattctgagagagcgaggttatgac
tacaagtcacgctattgtggccactgtaataccaccactgacataaaagaagccaacttt
tttggaagtaatggtcagtacattgtcagtggttccgacgatggatcctttttcatctgg
gagaaagagacgacaaaccttgttcgtgttctacagggtgatgagtcgattgtgaactgt
ctgcaaccacacccaaggcactgcttcctcgcaacaagtggcattgatcctgtggtccgt
ctctggagtccaagaccagagactgaagatcaaaatgagagagtaattgaggacatggaa
ggggcttcacaggcaaaccaacgacgaatgaatgcagaccccctagaagtaatgctttta
aacatgggatacaggatcactggactgaccaacagtgggatggcctcggatgatgaggaa
agcactgaaggccaggtgcagtgccggccaagttaa
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integrated database retrieval system
