Raja brachyura (blonde ray): 145385285
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Entry
145385285 CDS
T12046
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rbra
Raja brachyura (blonde ray)
Pathway
rbra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rbra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
145385285 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rbra03036
]
145385285 (sin3aa)
Chromosome and associated proteins [BR:
rbra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
145385285 (sin3aa)
REST complex
145385285 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
145385285 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
145385285
NCBI-ProteinID:
XP_080109367
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All DBs
Position
39:13150642..13264755
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AA seq
1272 aa
AA seq
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MKRRLDEQETAYASQQRRIAETFSHQHRVLAPAPPVYEAVSENMQPTAGIQYSVTPGYQV
SAMPQSSGSHSHTPAVHSGHHHTASVQPHGQQVVSQSHAHPPGAPATPVQGQQQFQRLKV
EDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFN
TFLPPGYKIEVQTNDMVNVTTPGQVHQITPQHAAQPQSQQQHQQQPQQHAAPAPAQPAPQ
PPPAKIAKPLQSQTHTPTSQPNASMAPYASPRSPPVQPHTPVTSAHAATPPMQNNQPVEF
NHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVAR
LFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKADSVRNDHGSTVKKPQLNNNKQRSNQNG
CQIRRHSSTGATPPVKKKPKMLGLKDQSLAEVNKHGAGTETLFFEKVRKALRSAEAYENF
LRCLVIFNQEVITRAELVHLVFPFLGKFPELFVWFKNFLGYKESSHIEAFPKERATEGIA
MEIDYASCKRLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVILETNLATIRVLEAVLKKLSRMSADDQAKFRLDNTLGGTSEV
IHRKAIQRIYADKAADILDGLKKNPGVAVPIVLKRLKAKEEEWREAQRGFNKIWREQNEK
YYLKSLDHQGINFKQNDTKILRSKSLLNEIESIYDERQEQASEDHAHVPPGSHLTFVYED
KQIMEDAASLIIHHVKRQAGIQKEDKYKIKQIIYHFIPDLLFAQRGELSDVEDEKEEDED
EEMDMDESTGATKKHNGIGSSPPKPKLMFSNTGAQKLRGMDDVYNLFYVNNNWYIFIRLH
QILCSRLLKIYNQAEKQIEEECREREQEMLTGKRDKNDSPAIQLRLKEPMDIDVEDYYPA
FLDMVRNLLDGNMDSSQYEDTLREMFTIHAFIAFTMDKLIQSIVRQLQHIVSDEICIQVT
DLYLSESGNCATGGPLATTSSRAAIESNYQRKSEQLMSDENCFKLTFIHSREQVTLTIDL
LDTEEENSDGPVEAERWSDFMDRYMNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGRE
QQEKEGKECSNKKSMENAENYDKAQCNFKLNSYKMVYVFKSEDYMYRRTALLRARQSHER
VSTRLHQRFQAWVDKWSKEHVTREMAAESSKWLMGEGLEGMLPCTTTCEKETLHFMKINK
YRVKYSALFKGP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgactggatgagcaagaaacagcttatgcatctcagcaacgtcgcattgct
gaaaccttttcacaccagcatcgtgtactagccccagcacctcctgtctacgaggctgta
tcggagaacatgcagccgacagcaggcattcagtactcggtcacaccaggataccaggtt
tcggctatgcctcagagctctggtagtcacagccatactccggctgtgcacagtggccac
catcacactgcgtcagttcaacctcatggacagcaggtggtgtcccagagccatgctcac
cctccaggagcaccagctacaccagtccaagggcagcagcagttccagaggctcaaggtg
gaagatgctttgtcatatctggaccaggtgaaattacaatttggaaaccagcctcaggtt
tacaatgactttctagatatcatgaaggagttcaagtctcagagcatcgatacccccggc
gtgattagccgcgtttcccagctcttcaaagggcaccctgacctcatcatgggcttcaac
accttcctgcctccgggctacaagattgaggtgcagaccaatgacatggtgaatgtgacg
acacccggccaagtccatcagatcactccccagcacgcggcccagccccagagtcagcag
caacaccagcagcaaccacagcagcacgctgcgcctgcaccggcacagccagcaccacaa
ccgccacctgccaaaatcgccaagccactgcagtcacaaacacacacgccaaccagccaa
ccaaatgcatcaatggctccatatgcctctccccggtcacctccggtgcagcctcacact
ccagtcacgagcgctcacgccgcgacgcctcccatgcagaacaatcagcccgtggagttc
aatcatgccattaactatgtcaacaagatcaaaaaccgcttccagggacagcccgacatc
tataaggcctttctggagatcctacatacgtaccagaaggagcaacggaatgcaaaagag
gccggtggaaactacacgccagcattgactgagcaggaggtttatgcccaagtagcaagg
ctgtttaaaaaccaggaggaccttctgtcagagtttgggcagttcctgcccgatgcaaac
agctctgttctgctgagtaaaacgacggcagagaaagctgactcggtcaggaatgaccac
ggtagcacagtgaagaagcctcagctgaacaataataagcaacgaagcaatcagaatggc
tgccagatccgtcgccactcaagcaccggagccactcctcccgtgaaaaagaaaccaaag
atgttgggattgaaagaccagtccctggctgaggtcaataagcatggagctggaacagaa
actttattctttgaaaaggttcgaaaagcactgcggagtgcggaggcatatgagaatttc
ctacgctgtcttgtgatttttaatcaagaagtgattactcgtgcagaactggtccacctt
gtgtttccgttcctgggaaagtttcctgagctctttgtctggttcaagaatttcctgggt
tataaggaatcttctcacattgaggcatttccaaaggagagagctacagagggcattgca
atggagattgattatgcttcttgtaaacgacttggttcaagttaccgtgccctgcccaag
agcttccaacaacccaagtgcactggcagaactcctctttgcaaagaggttctgaatgat
acgtgggtgtctttcccctcctggtccgaagactccaccttcgtcagctcgaagaaaacg
caatatgaagagcacatctacaggtgtgaagacgagaggtttgagctcgatgttatcttg
gaaacaaacctagcaacaatccgtgtcctggaggctgttctgaagaagctgtcacggatg
tcagcggatgaccaagctaaattccgtttggataacacccttggaggaacctcagaagtg
attcaccggaaggctattcagaggatatacgcagacaaggctgcagacattcttgatggc
ctgaaaaagaaccctggtgtagctgtccctattgtgctgaaaaggttaaaagcaaaggag
gaagaatggcgggaagcacaaagaggtttcaataagatctggagggagcagaatgaaaag
tactacttgaagtccctggatcatcagggaattaacttcaagcagaacgacaccaaaatt
ctgcgctccaaaagtttgctcaatgagattgagagcatatatgatgagcggcaagaacag
gcatctgaagatcacgcacatgtgccacctggctctcacttaacctttgtttatgaggac
aagcagatcatggaggatgcagcctccctcattatccatcacgtcaagcgccaagctggg
atacagaaggaagataagtacaaaatcaaacaaataatttatcatttcatcccagacctt
ttgttcgctcagcgaggtgagctgtcagatgtagaggatgagaaagaagaggatgaagat
gaagaaatggacatggacgagagcacgggggcaactaaaaagcacaatggcattggcagt
agcccacccaagccaaaacttatgttcagcaacacgggagcacaaaaactgcggggcatg
gacgatgtgtacaacctattctatgtgaacaacaactggtacatcttcatccggctgcac
cagatcctttgctcacgactcctgaagatttacaatcaagcggagaagcagattgaggag
gaatgcagagaaagggaacaggagatgctgacaggaaaacgagacaaaaatgacagtcct
gctattcagcttcgactaaaggaaccgatggatattgatgtggaagactattacccagct
ttccttgatatggtgcggaaccttctagatggcaacatggattcctcccagtatgaggac
acccttcgggaaatgtttaccattcacgctttcatcgcctttacaatggacaaactcatc
cagagtatagtcaggcagctgcagcatattgtgagcgatgaaatctgtatacaggtgacc
gatctctacctatcagagagtggaaactgtgccaccggaggccccttggccaccacctcc
tcccgagctgctatcgaaagcaactaccagcgcaagtctgaacagctcatgtcagatgag
aactgcttcaagcttacattcatacacagcagagaacaagtgacgttgactattgatctg
ctggacactgaagaggaaaactcagatggtcccgtggaagcagagcgctggtcagacttt
atggatcgttatatgaattcagattctacctctcctgaactacgggaacatctagcacag
aaacctgtgttcctgccaaggaatctacgccgaattcgcaagtgccaacggggtcgggag
caacaagaaaaagaagggaaggaatgcagcaataagaaatctatggagaatgcggagaat
tatgataaagcacagtgcaattttaaactcaactcgtacaagatggtgtatgtcttcaaa
tcagaagactacatgtacaggaggactgcactgcttagggctcggcagtcccacgagcgg
gtcagcacgcggttacatcagcggttccaggcctgggtggacaaatggagcaaagagcac
gtgacccgcgagatggctgccgagtccagcaagtggctaatgggcgaggggttggagggc
atgctgccttgcacgaccacctgcgaaaaggaaacgctgcacttcatgaaaatcaacaag
tacagggtgaaatacagtgcactgttcaaggggccatga
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