Rhodobiaceae bacterium SMS8: RHODOSMS8_00134
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Entry
RHODOSMS8_00134 CDS
T05596
Symbol
groL5
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHODOSMS8_00134 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbs03019
]
RHODOSMS8_00134 (groL5)
03110 Chaperones and folding catalysts [BR:
rbs03110
]
RHODOSMS8_00134 (groL5)
03029 Mitochondrial biogenesis [BR:
rbs03029
]
RHODOSMS8_00134 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbs04147
]
RHODOSMS8_00134 (groL5)
Enzymes [BR:
rbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHODOSMS8_00134 (groL5)
Messenger RNA biogenesis [BR:
rbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHODOSMS8_00134 (groL5)
Chaperones and folding catalysts [BR:
rbs03110
]
Heat shock proteins
HSP60 / Chaperonin
RHODOSMS8_00134 (groL5)
Mitochondrial biogenesis [BR:
rbs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHODOSMS8_00134 (groL5)
Exosome [BR:
rbs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHODOSMS8_00134 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
RHODOSMS8_00134 (groL5)
Exosomal proteins of breast cancer cells
RHODOSMS8_00134 (groL5)
Exosomal proteins of colorectal cancer cells
RHODOSMS8_00134 (groL5)
Exosomal proteins of bladder cancer cells
RHODOSMS8_00134 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AWY99692
LinkDB
All DBs
Position
complement(127655..129301)
Genome browser
AA seq
548 aa
AA seq
DB search
MAKQVVFGRDAREEMLKGVNVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIE
LEEKFENMGAQMIREVASKTNDIAGDGTTTATVLAQSIVQEGIKAVAAGMNPMDLKRGID
LAVDAALADLTKRSKKVKSNEEIAQVGKISANGETEIGDMIAEAMSKVGNEGVITVEEAK
SLESELDVVEGMQFDRGYLSPYFITNPDKMTVEQESPLILLHESKLTSLQAMLPILEAVV
QSSRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEDLGIKLENVTLDMLGTAKSVGISKDDTTIVDGAGKKKDIEGRVAQIRAQIEETSSDYD
REKLQERLAKLAGGVAVLKVGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGSALLR
ATKAVAAVESDNADILAGVKIVLKALEAPIRQISENAGVEGSIVVATVLGKAGSFGFDAQ
NETYVDLVAEGIIDPTKVVRTALTDASSVAGLLITTEAMIADKPSEGGAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaagtagtattcggccgtgacgcccgtgaggagatgctgaaaggcgtcaac
gttctcgcgaatgcggtcaaagtgacgctcggccctaagggtcgtaacgtcgttatcgac
aagtctttcggcgcaccgcgcatcacgaaagacggtgtaacggtcgccaaagaaatcgaa
ctggaagaaaagttcgaaaacatgggcgcccagatgatccgcgaagtcgcttccaagacg
aacgacattgctggtgacggcacaacaacagcgaccgttctcgcacagtccatcgttcag
gaaggcatcaaagctgttgctgccggcatgaaccctatggacctgaagcgcggcatcgac
cttgctgttgacgcagccctggctgacctcacaaagcgctccaagaaagttaagtcgaac
gaagaaattgcccaggtcggcaagatctccgctaacggcgaaactgaaattggcgacatg
attgctgaagccatgtcgaaagtcggcaatgaaggcgtgatcacggttgaagaagccaag
tcactggaaagcgaactcgacgtcgttgaaggcatgcagttcgaccgtggctacctgtca
ccttacttcatcaccaacccagacaagatgacggttgagcaggaaagcccgcttatcctt
ctgcacgaaagcaagctgaccagcctgcaagccatgctcccaatcctggaagctgttgtg
cagtcatcacgtcccctgcttatcattgcagaagacattgaaggcgaagcgcttgcgacc
ctcgtggtcaacaagctgcgcggtggcctgaaaatcgctgccgtgaaagcacctggcttc
ggtgatcgccgcaaagcgatgctcgaagacatcgcgatcctgacaggcggcaccgtgatc
tctgaagatctcggcatcaagctcgaaaatgtcacactcgacatgctcggaactgccaaa
tcagttggcatctccaaagacgacacaacaatcgtcgatggcgctggcaagaagaaagac
attgaaggtcgcgttgctcagatccgcgcgcagatcgaagaaacatcttctgattatgac
cgtgagaagctgcaggaacgtctggcgaaactcgctggtggtgttgcagttctcaaagtt
ggcggcgcaaccgaagttgaagtgaaagaacgcaaagaccgcgttgatgacgctctcaac
gcaacacgcgctgctgttgaagaaggcatcgtccctggtggcgggtccgcacttctgcgc
gcaacaaaagctgttgcagctgttgaaagcgacaatgctgatattctggctggtgtgaag
atcgtgctgaaggctcttgaagcgcctatccgccagatctctgaaaatgccggtgttgaa
ggctccatcgttgtggcaactgttcttggcaaagctggctcattcggcttcgatgctcag
aacgaaacctatgtcgaccttgttgccgaaggcatcattgacccgactaaggttgtgcgc
accgcactgaccgatgcgtcctctgttgctggtcttctgatcacaaccgaagcgatgatc
gctgataagccatctgaaggcggtgcacctgcaatgcctgatatgggcggcatgggcggc
atgggtggcatgggcggcatgatgtaa
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