Rhodobiaceae bacterium SMS8: RHODOSMS8_00416
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Entry
RHODOSMS8_00416 CDS
T05596
Name
(GenBank) putative HTH-type transcriptional regulator
Organism
rbs
Rhodobiaceae bacterium SMS8
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_8
HTH_Tnp_IS1
Sigma70_r4_2
CATRA-C
Motif
Other DBs
NCBI-ProteinID:
AWY99969
UniProt:
A0A2Z4UG60
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All DBs
Position
complement(415700..416725)
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AA seq
341 aa
AA seq
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MVNPQTISVGWMSAAIDQLVAHGLDRNALVAELGDLPTATGLPNRQLQLILARRLWHLVA
DLNDDPLLGLKVGAALPLQATNIVSLVMLHSPTVTDMIRNARTYQGLVSNNGFYSARTVK
VGLDTVYRAEPAAILSHPLQIDSILSVTLSLMHHAGLPDIRPEFVRVTAPDPSLQSAYET
FFRCPVEMGSDEPGYVLSNTNLKREVPHADAALLAALQAHGDTLLKAQQRLDQLGFTVRT
AITARGSHRVTCAEVADDLGLGVRTLQRRLAEAGTTFRRLCEEASMEEAERLLQQTDMAV
TEIAHRLGYSEPSSFSRAIFNWYGMRPSALRQKTMALVSAS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaccctcaaacaatctctgtcgggtggatgagtgcggcgattgatcaactggtc
gcccacggtctcgaccgaaatgcccttgttgcagaattaggcgaccttcccacagcaacc
ggcctgccgaaccggcaattgcagctgatccttgcgcgccgtctttggcaccttgtggca
gatctcaacgatgatccgttgctcggcctgaaagtgggcgctgcacttccgctgcaagca
accaacatcgtctccctggtgatgctgcacagcccaacagtgacggacatgatccgcaac
gcgcgcacctatcagggattggtgagcaataacggattctattcggcccgcacagtcaaa
gtcggacttgatacggtttaccgagcagaacctgcagcgatcctctcacaccctcttcaa
atagactcaattctgtccgtcaccctgtctcttatgcatcacgctggccttcccgacatt
cgtccagaatttgttcgcgtcacggcgcccgatccctcgcttcaatctgcctatgagacc
ttcttccgctgtccggttgaaatgggcagtgacgagcctggctatgtcttgtccaacaca
aacctcaaacgcgaggtcccccacgcggacgccgctttactggcagcgctgcaagcgcat
ggggacacgcttctcaaagcacaacagaggctcgatcagctgggattcaccgtccgcacc
gcgatcaccgcgcggggttcccatcgcgtgacctgcgctgaggtggcagatgacctgggc
cttggcgtgcgtaccttgcaacgccgcctcgcggaggcaggcaccacgtttcgacgcctt
tgtgaggaagcatccatggaagaagcggagcgtcttcttcaacagacagacatggccgtc
actgaaattgcccaccgacttggatattcagaacccagctccttttcgcgtgccatcttc
aattggtacggcatgcgcccgtcagccctgcgccaaaaaacaatggctctcgtcagcgca
tcataa
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