Rhodobiaceae bacterium SMS8: RHODOSMS8_00820
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Entry
RHODOSMS8_00820 CDS
T05596
Symbol
ybdL
Name
(GenBank) methionine aminotransferase
KO
K14267
N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.17
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00300
Lysine biosynthesis
rbs01100
Metabolic pathways
rbs01120
Microbial metabolism in diverse environments
rbs01230
Biosynthesis of amino acids
Module
rbs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHODOSMS8_00820 (ybdL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rbs01007
]
RHODOSMS8_00820 (ybdL)
Enzymes [BR:
rbs01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.17 succinyldiaminopimelate transaminase
RHODOSMS8_00820 (ybdL)
Amino acid related enzymes [BR:
rbs01007
]
Aminotransferase (transaminase)
Class I
RHODOSMS8_00820 (ybdL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Asp_aminotransf
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
AWZ00373
UniProt:
A0A2Z4UGY4
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Position
836184..837356
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AA seq
390 aa
AA seq
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MRPGNTVFSGLRTTIFSTMSAMAMEHGAINLGQGFPDDEGPVELRERAAQAIMAGPNQYP
PSMGLPELRKAVAHHDSRFYGLNVDWQTETLVTSGATEALADCFLALLNVGDEAILIEPF
YDSYLPMVEATGARAVTVGLEAPNWDLDLEVLAGAFSDKTKLIVVNTPMNPTGKVFSKAE
LQGIADLAQKHDAYVILDEVYEHLVYTGAAHETMMALPGMRDRCVRIASAGKTFSLTGWK
IGYVTATPDLLALVNKAHQFVTFTTPPAFQLAVAWGLGQGDAYFQNLATDLEQKRDLLSK
GLAAVGFDVVRSDGTYFVTTDISGLGYNGTDLDFCKEITANAGVSAIPVSPFYKPRDGGV
GIPGNMVRFCFSKQPEVLEESVFRLRRYFG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcggccaggaaacacagtcttctcagggctcaggacgacaatcttcagcaccatgtcg
gcaatggcgatggagcatggggccatcaatctgggtcaaggattcccggatgacgaggga
ccggtggagcttcgcgaacgggccgcccaggccatcatggccggacccaaccaatatccg
ccttctatggggcttcctgagcttcgaaaagcggtcgcccatcatgactcgcgtttctat
gggctgaatgtcgattggcagacggagactctcgtgacatcaggcgcaacggaggcattg
gccgattgtttcctggcgctcttaaacgttggcgacgaggcgatcctcattgagcccttc
tatgactcttacctgcccatggttgaggcaacaggtgcgcgcgctgtgacggttgggctg
gaggcgcccaattgggatcttgatctggaggtgctggctggtgcgttctcagacaagacc
aagctcattgttgtgaacacgcccatgaacccgacaggcaaggtcttctccaaagccgag
ctccagggcatcgcagatcttgcgcaaaagcatgatgcctatgtgatcctcgatgaggtc
tacgagcacctggtctataccggagcagcccacgagacgatgatggccttgcctggcatg
cgagaccgttgcgtacgcattgcctcagcgggaaagacattttctctgacggggtggaaa
attggctatgtgaccgccacgccagacctgctggcgctcgttaacaaggcgcaccagttt
gtaacattcacaacgccccccgcgtttcagctggcagtggcctgggggctcgggcagggg
gatgcctatttccagaatctggcgacggatctggagcagaaacgcgatctcctgtccaaa
ggtctggcggcggtcggatttgatgtcgtgcgctctgatggaacctatttcgtcacaacc
gatatttccggcctaggctataacgggaccgatctggacttctgtaaagagataactgcg
aacgcgggcgtcagcgcaatcccggtcagcccattctacaagccacgcgatggaggtgtg
ggcattccgggaaacatggttcgcttctgtttttcaaaacagcctgaggtgctcgaagag
agtgtctttcgcctaagaaggtatttcggatga
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