Rhodobiaceae bacterium SMS8: RHODOSMS8_00988
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Entry
RHODOSMS8_00988 CDS
T05596
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03030
DNA replication
rbs03430
Mismatch repair
rbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHODOSMS8_00988 (dnaX)
03430 Mismatch repair
RHODOSMS8_00988 (dnaX)
03440 Homologous recombination
RHODOSMS8_00988 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbs03032
]
RHODOSMS8_00988 (dnaX)
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_00988 (dnaX)
Enzymes [BR:
rbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHODOSMS8_00988 (dnaX)
DNA replication proteins [BR:
rbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHODOSMS8_00988 (dnaX)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHODOSMS8_00988 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
Mg_chelatase
AAA_5
AAA_33
AAA_24
nSTAND3
AAA_14
NACHT
AAA_28
NPHP3_N
AAA_22
AAA_25
RNA_helicase
RuvB_N
NTPase_1
Rad17
Motif
Other DBs
NCBI-ProteinID:
AWZ00538
UniProt:
A0A2Z4UHS4
LinkDB
All DBs
Position
complement(992757..993872)
Genome browser
AA seq
371 aa
AA seq
DB search
MSDLPEPDRLGDFKHPRETNVLYGHSHAEEALFDAFMSGRMHHAWLLTGPKGIGKTTLAY
RMAKFVLTYSDAEKARAMGAENLSVSEDMPAARQILAQGHPDLLVIRRPVDEKTKKAKSV
IPVDQVRKTSGFFGKSAGAGGWRVCIVDSADEMNANSANALLKVLEEPPAKSLFLLVSHQ
PGRLLPTIRSRCRQLPMPALSSSAMDQVLGANGADLSADDIAAIDVLAEGSAGRALTIAS
GDGLELYRSMVGLICQLPRPDIAAMHALADKAARRGAEQTFDILVDLMRDWVARAVRQGA
GGPANPDIVPGEATAMAMLVHGQNLDRWVEVWEKIGELATRAEALNMDRKLVILNAFSML
EAAASSMTQSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccttccagaacccgaccgacttggcgatttcaagcaccccagagaaaccaat
gttctctatgggcacagccatgccgaggaagcgctgtttgacgcctttatgagcggacgg
atgcatcacgcctggctgttgacgggccccaagggtatcggcaagacgacactcgcatat
cggatggcgaagttcgtgctcacctattccgatgcggaaaaagctcgggcgatgggtgca
gaaaatctgtctgtctctgaggacatgccagccgcgcgccaaattctcgctcaaggacat
ccagacctgctggtcatccgacgccctgtcgatgagaagacgaagaaagccaagtccgtc
attcctgttgatcaggtccgaaagacctctggctttttcgggaagagcgcaggagcaggt
gggtggcgcgtctgcattgtggacagcgctgatgaaatgaatgcgaactccgcaaatgcc
ctgctcaaagtcctagaggaaccgcctgcaaaatccctattcctgctcgtgagccaccag
cccggacggctgctgcccaccattcggtcgagatgtcggcaattgcccatgcctgcgctt
agtagcagcgccatggatcaggtgctcggcgccaatggcgctgatctcagcgctgacgac
atcgctgctattgatgttttggcggagggaagtgccggacgggcgctcaccattgcatca
ggcgatggtctggagctttatcgatccatggtcggactgatctgccagctaccaaggccg
gatatcgcggcgatgcacgcccttgcggacaaagccgccagacggggtgccgaacaaaca
tttgacatattggtcgacctaatgcgcgattgggtcgcccgggcggtacgccagggtgct
ggcggtcctgcaaaccccgatattgttcctggcgaagccactgccatggccatgctggtt
catgggcaaaaccttgatcgctgggtcgaggtgtgggaaaagatcggcgaattggccaca
cgcgcagaggcgcttaacatggatcgcaagttggtgattttgaacgcattttcgatgctc
gaggcggctgcttccagcatgacccagtctgcttaa
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