Rhodobiaceae bacterium SMS8: RHODOSMS8_00991
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Entry
RHODOSMS8_00991 CDS
T05596
Name
(GenBank) RlpA-like protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
RHODOSMS8_00991
Enzymes [BR:
rbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RHODOSMS8_00991
Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RHODOSMS8_00991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AWZ00541
UniProt:
A0A2Z4UHQ4
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All DBs
Position
complement(995765..996817)
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AA seq
350 aa
AA seq
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MDNQKATDTTFRSGRGMKAMPRPKRPSLRRLSAVVGLLMSPLVAAGCAEAQLGAHVAKSL
GQGTGGGVYKVGNPYKIDGEWYYPAEDENYDQKGVASWYGPNFHGKPTANGEVFDQNLVT
AAHPTLPMPIYARVTNLENGRSLVVRINDRGPFAADREIDLSRRSAELLGFIKQGTTQVR
VQYLRRAPLEGDVPNVQSVVAENGFTSPPPQQPSDRRNVIAAPTEAVQVASLTPTYPVSA
AAGTLLPTDMAPIPDTPAATQPSPTQSSNVAAPVLPGTYVQAGAFANQANAEALKIQLSD
LGPVDVNPINVNGTELYRVRVGPLQDPQAANSMLQQITGRGHTNARVVIE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcagaaagccaccgatacgacattccgtagtggcaggggcatgaaagccatg
ccgcgcccaaaacgtccatcactccgacggttatcggcggtggtcggcttgttgatgagc
cccttagtggctgcgggatgcgctgaagctcaattgggtgcccatgtggccaagtctctg
ggtcaaggcaccggcggcggtgtctacaaggtcggcaatccctacaaaattgatggcgag
tggtattacccggcagaagatgaaaactatgaccagaagggcgttgcttcctggtatggg
ccgaatttccacgggaaaccaaccgccaatggcgaagtgtttgatcagaatcttgtaact
gccgcccatcccacgctgcccatgccgatctatgcgcgggtgacaaacctcgaaaacggt
cggtccctcgttgtccggattaacgaccgggggccgtttgctgccgaccgggaaattgat
ctttccagacggtcagctgaacttttggggttcataaagcagggaacaacacaggttcgg
gttcagtatctgcgccgtgctcccttggagggtgatgtcccgaacgttcaatccgttgtc
gctgaaaatggtttcacctcgccgccacctcaacaaccttcagatcgtcgtaatgtgatc
gctgccccgacagaagcggtacaagtcgcatcgctgacgccaacctatcccgtgagcgct
gctgcaggcaccttactgccaaccgacatggcgccgatccccgatacacctgctgcaacg
cagccgtcgcccacgcagtcttccaacgtggccgcgcctgtcctgccgggcacttatgtg
caagcgggcgcttttgccaatcaggccaatgccgaagctctcaaaatccagctgtctgac
ctcgggcctgtcgatgtgaacccgatcaatgtcaacggcacagaactctaccgtgtccgc
gttggtcctctgcaagacccgcaggcggccaatagcatgttgcaacaaataaccgggcgt
ggtcacacaaacgccagagttgtcatcgaatag
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