KEGG   Rhodobiaceae bacterium SMS8: RHODOSMS8_01241
Entry
RHODOSMS8_01241   CDS       T05596                                 
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
rbs  Rhodobiaceae bacterium SMS8
Pathway
rbs00330  Arginine and proline metabolism
rbs00480  Glutathione metabolism
rbs01100  Metabolic pathways
rbs01110  Biosynthesis of secondary metabolites
rbs04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rbs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    RHODOSMS8_01241 (ldc)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    RHODOSMS8_01241 (ldc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    RHODOSMS8_01241 (ldc)
Enzymes [BR:rbs01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     RHODOSMS8_01241 (ldc)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N NadA
Other DBs
NCBI-ProteinID: AWZ00783
LinkDB
Position
complement(1235607..1236749)
AA seq 380 aa
MLDQLDPSYPIFVIWPDVIRAKVSVFIDHFPGEVLYAVKCNPHPFILETLFGAGICSFDT
ASLTEISQVRDLLPDANCYFNHPVKGRGALETAADVYGLTDFVIDDAKELDKIEQIVGTD
ATISVRFATGGTGAVFDLSSKFGVSADDAVLLLQDVVRRGMRPALTFHVGSQCIDIEAYR
TALMTAKTIIEKAGVELAYLDIGGGFPAPYTGVNVDLAAMLKVISDTVTELTLDMPLLCE
PGRALAVDGCSLLLQVHLRKGDTLYVNEGIYGCLSEVNIGKFIMPTRAFGRGRTLKGDPK
AFRIFGPTCDNLDVLDNPFLVPDDIQEGDWIEVGLMGAYSLALATGFNGFVTETVVAIDG
PCQWLDEAKQIAESAEISLE
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgctggatcagcttgacccgtcttacccgatcttcgtgatttggccggatgtgatccga
gcgaaggtgagcgtgtttatcgaccattttcctggcgaggtgctttatgcagtcaagtgc
aaccctcatccgttcattctggaaacgctttttggtgctggtatttgctcatttgacact
gcgtctttgacggaaatctcgcaagtgcgtgatttgttgcctgacgcaaactgttacttc
aaccaccccgtcaaagggcggggcgctctggaaaccgcagcagacgtttacgggcttacc
gactttgtgatcgatgatgctaaggagctcgacaagatcgaacaaatcgtcggcacagat
gcaaccatcagtgttcgttttgcgactggcgggacaggtgctgtttttgatctgtcgagc
aagttcggtgtgtctgcggatgacgcggtactcttacttcaagatgtggtgcgcaggggc
atgagacccgcgcttacatttcatgtcggcagtcaatgtattgatatcgaagcctatcgg
acagcgttgatgactgcgaaaacgattatcgagaaggcgggagttgagcttgcctatctc
gatattggaggtggttttcctgccccttacacaggggttaatgtcgacttggcggcaatg
ctaaaagtgatttcggacaccgtgacggaactcaccctcgacatgcctttgttgtgcgag
ccggggcgtgcgcttgcggtagacggatgctcgcttctgttgcaggtgcatttgcgcaaa
ggcgatacgctctatgttaacgagggaatttacggctgcttgtcagaggtgaatattggc
aagttcatcatgccaacacgcgcttttggtcgcggtcgtaccttgaagggtgacccgaaa
gcctttcgaatctttgggccaacctgtgataatcttgatgttctggataacccgtttctg
gtgccggacgatatccaggagggggactggattgaggttggcctgatgggagcttattcg
ctcgcgctcgcaaccggtttcaatggatttgtgactgagaccgtggttgccattgacggg
ccgtgtcaatggctggatgaggcgaagcagatcgctgagagcgcagaaatcagccttgaa
tga

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