Rhodobiaceae bacterium SMS8: RHODOSMS8_01241
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Entry
RHODOSMS8_01241 CDS
T05596
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00330
Arginine and proline metabolism
rbs00480
Glutathione metabolism
rbs01100
Metabolic pathways
rbs01110
Biosynthesis of secondary metabolites
rbs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RHODOSMS8_01241 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RHODOSMS8_01241 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RHODOSMS8_01241 (ldc)
Enzymes [BR:
rbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RHODOSMS8_01241 (ldc)
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NadA
Motif
Other DBs
NCBI-ProteinID:
AWZ00783
LinkDB
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Position
complement(1235607..1236749)
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AA seq
380 aa
AA seq
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MLDQLDPSYPIFVIWPDVIRAKVSVFIDHFPGEVLYAVKCNPHPFILETLFGAGICSFDT
ASLTEISQVRDLLPDANCYFNHPVKGRGALETAADVYGLTDFVIDDAKELDKIEQIVGTD
ATISVRFATGGTGAVFDLSSKFGVSADDAVLLLQDVVRRGMRPALTFHVGSQCIDIEAYR
TALMTAKTIIEKAGVELAYLDIGGGFPAPYTGVNVDLAAMLKVISDTVTELTLDMPLLCE
PGRALAVDGCSLLLQVHLRKGDTLYVNEGIYGCLSEVNIGKFIMPTRAFGRGRTLKGDPK
AFRIFGPTCDNLDVLDNPFLVPDDIQEGDWIEVGLMGAYSLALATGFNGFVTETVVAIDG
PCQWLDEAKQIAESAEISLE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcagcttgacccgtcttacccgatcttcgtgatttggccggatgtgatccga
gcgaaggtgagcgtgtttatcgaccattttcctggcgaggtgctttatgcagtcaagtgc
aaccctcatccgttcattctggaaacgctttttggtgctggtatttgctcatttgacact
gcgtctttgacggaaatctcgcaagtgcgtgatttgttgcctgacgcaaactgttacttc
aaccaccccgtcaaagggcggggcgctctggaaaccgcagcagacgtttacgggcttacc
gactttgtgatcgatgatgctaaggagctcgacaagatcgaacaaatcgtcggcacagat
gcaaccatcagtgttcgttttgcgactggcgggacaggtgctgtttttgatctgtcgagc
aagttcggtgtgtctgcggatgacgcggtactcttacttcaagatgtggtgcgcaggggc
atgagacccgcgcttacatttcatgtcggcagtcaatgtattgatatcgaagcctatcgg
acagcgttgatgactgcgaaaacgattatcgagaaggcgggagttgagcttgcctatctc
gatattggaggtggttttcctgccccttacacaggggttaatgtcgacttggcggcaatg
ctaaaagtgatttcggacaccgtgacggaactcaccctcgacatgcctttgttgtgcgag
ccggggcgtgcgcttgcggtagacggatgctcgcttctgttgcaggtgcatttgcgcaaa
ggcgatacgctctatgttaacgagggaatttacggctgcttgtcagaggtgaatattggc
aagttcatcatgccaacacgcgcttttggtcgcggtcgtaccttgaagggtgacccgaaa
gcctttcgaatctttgggccaacctgtgataatcttgatgttctggataacccgtttctg
gtgccggacgatatccaggagggggactggattgaggttggcctgatgggagcttattcg
ctcgcgctcgcaaccggtttcaatggatttgtgactgagaccgtggttgccattgacggg
ccgtgtcaatggctggatgaggcgaagcagatcgctgagagcgcagaaatcagccttgaa
tga
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