Rhodobiaceae bacterium SMS8: RHODOSMS8_01266
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Entry
RHODOSMS8_01266 CDS
T05596
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHODOSMS8_01266 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_01266 (recO)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RHODOSMS8_01266 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RHODOSMS8_01266 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AWZ00808
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All DBs
Position
complement(1259836..1260585)
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AA seq
249 aa
AA seq
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MEWRDEGVVLSVKSHGETSAIVELFTSEHGRHAGLVRGGASRRMKPVLQPGNTVSATWRA
RLPDHLGNFTIDLDRARAGILMDDPLSLAGLSGACAVVSALPERERHTALYEAFIVLLDT
LEEVDIWPAVFVRFELGLLQELGFGLDLTKCAATGKTEDLIYVSPKTGRAVSREAGELYQ
KRLYRLPPFLVGGRVTAAEPEDVADGLRLTGHFLERYLFGPFHGRLPDARYRLIDRLSNA
AKARTLGDQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttggagtggcgtgacgaaggtgtcgtgctttccgtcaaatcgcacggcgagaccagtgcg
attgtcgaactcttcacgtcggaacatgggcgccacgctggtttggtgcgtggaggtgcc
tcacggcggatgaagccagtccttcagcctggaaacactgtgagcgcgacctggcgggct
cgtctgccggatcatttgggtaacttcaccatcgaccttgatcgcgcacgcgccgggatc
ttgatggatgacccgttgtcgctagcgggcttgagtggagcttgtgccgtcgtctctgct
ctgccggagagggagcgccacacggcgctctatgaggcgtttattgttcttcttgatacg
ttggaggaagtcgacatctggccggcggtgttcgtccgatttgaattgggacttctgcaa
gagctgggctttggccttgatctgacgaaatgtgctgcgacaggcaagactgaggatctc
atctatgtgtcgcccaagacaggccgtgcggtgagccgtgaggcgggggagctctaccag
aaacggctctatcgcttgccaccgtttctggttggcgggcgtgtgactgcagctgaaccg
gaggatgttgccgatggcttgcgcctgacggggcactttctggaacgctacctgtttggt
ccgtttcatggacgattgccggatgcgcgctatcgtctgattgaccggctttcaaacgcc
gccaaagccaggacacttggcgatcaataa
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