Rhodobiaceae bacterium SMS8: RHODOSMS8_01268
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Entry
RHODOSMS8_01268 CDS
T05596
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RHODOSMS8_01268 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbs03019
]
RHODOSMS8_01268 (rnc)
03009 Ribosome biogenesis [BR:
rbs03009
]
RHODOSMS8_01268 (rnc)
03036 Chromosome and associated proteins [BR:
rbs03036
]
RHODOSMS8_01268 (rnc)
Enzymes [BR:
rbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RHODOSMS8_01268 (rnc)
Messenger RNA biogenesis [BR:
rbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHODOSMS8_01268 (rnc)
Ribosome biogenesis [BR:
rbs03009
]
Eukaryotic type
90S particles
RNase
RHODOSMS8_01268 (rnc)
Prokaryotic type
rRNA processing factors
RHODOSMS8_01268 (rnc)
Chromosome and associated proteins [BR:
rbs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RHODOSMS8_01268 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AWZ00810
LinkDB
All DBs
Position
complement(1261571..1262254)
Genome browser
AA seq
227 aa
AA seq
DB search
MTDEIAALAERVGHQFKDVTLLRRALTHGSQALAQGELGYERLEFLGDRVLGLAIADMLY
HRFRAEEEGDLAVRLNALVRAETCATVARELDIGAALRMTKGEEKAGARDRGSILADACE
AVIAALYLDGGMPVARAFIETWWGPKLEAMKAPPRDPKTILQEWAQAQKKGLPRYDAVGR
TGPDHAPEFEIELTVSGLPPVLAKGSSKRMAEQAAAERMLTREGISS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaaattgcggcattagcggaacgggttggacatcagttcaaggatgtaacc
ctgcttcgacgtgcgttgacccatggaagccaggcattggctcagggtgagcttgggtat
gagcggttggaatttctaggcgaccgcgtccttggtctggcgattgctgacatgctgtac
catcgctttcgggcagaagaagaaggcgatcttgcggttcgtctgaatgcacttgtccga
gcggagacctgtgccactgtcgcgcgtgagttggatattggcgctgcccttcgcatgaca
aagggcgaggagaaagccggcgcgagagatcgaggaagcattctggctgatgcttgtgaa
gccgtcattgcggcgctctatcttgatggggggatgcccgttgccagggcattcattgag
acctggtggggtccgaagttagaagccatgaaagcaccgccgcgagaccccaaaaccatc
ttgcaggaatgggcgcaagcgcagaagaagggcctgccacgctatgatgcagtggggcga
accgggccggatcatgcgccagaatttgagattgaattgacggtgtccggattgcctcca
gttttggcaaaaggatcttccaaacgaatggccgagcaggctgctgcggagcggatgttg
acgcgagaaggaattagctcatga
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