KEGG   Rhodobiaceae bacterium SMS8: RHODOSMS8_01268
Entry
RHODOSMS8_01268   CDS       T05596                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rbs  Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:rbs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RHODOSMS8_01268 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbs03019]
    RHODOSMS8_01268 (rnc)
   03009 Ribosome biogenesis [BR:rbs03009]
    RHODOSMS8_01268 (rnc)
   03036 Chromosome and associated proteins [BR:rbs03036]
    RHODOSMS8_01268 (rnc)
Enzymes [BR:rbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RHODOSMS8_01268 (rnc)
Messenger RNA biogenesis [BR:rbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RHODOSMS8_01268 (rnc)
Ribosome biogenesis [BR:rbs03009]
 Eukaryotic type
  90S particles
   RNase
    RHODOSMS8_01268 (rnc)
 Prokaryotic type
  rRNA processing factors
   RHODOSMS8_01268 (rnc)
Chromosome and associated proteins [BR:rbs03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RHODOSMS8_01268 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: AWZ00810
LinkDB
Position
complement(1261571..1262254)
AA seq 227 aa
MTDEIAALAERVGHQFKDVTLLRRALTHGSQALAQGELGYERLEFLGDRVLGLAIADMLY
HRFRAEEEGDLAVRLNALVRAETCATVARELDIGAALRMTKGEEKAGARDRGSILADACE
AVIAALYLDGGMPVARAFIETWWGPKLEAMKAPPRDPKTILQEWAQAQKKGLPRYDAVGR
TGPDHAPEFEIELTVSGLPPVLAKGSSKRMAEQAAAERMLTREGISS
NT seq 684 nt   +upstreamnt  +downstreamnt
atgactgatgaaattgcggcattagcggaacgggttggacatcagttcaaggatgtaacc
ctgcttcgacgtgcgttgacccatggaagccaggcattggctcagggtgagcttgggtat
gagcggttggaatttctaggcgaccgcgtccttggtctggcgattgctgacatgctgtac
catcgctttcgggcagaagaagaaggcgatcttgcggttcgtctgaatgcacttgtccga
gcggagacctgtgccactgtcgcgcgtgagttggatattggcgctgcccttcgcatgaca
aagggcgaggagaaagccggcgcgagagatcgaggaagcattctggctgatgcttgtgaa
gccgtcattgcggcgctctatcttgatggggggatgcccgttgccagggcattcattgag
acctggtggggtccgaagttagaagccatgaaagcaccgccgcgagaccccaaaaccatc
ttgcaggaatgggcgcaagcgcagaagaagggcctgccacgctatgatgcagtggggcga
accgggccggatcatgcgccagaatttgagattgaattgacggtgtccggattgcctcca
gttttggcaaaaggatcttccaaacgaatggccgagcaggctgctgcggagcggatgttg
acgcgagaaggaattagctcatga

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