Rhodobiaceae bacterium SMS8: RHODOSMS8_01286
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Entry
RHODOSMS8_01286 CDS
T05596
Symbol
slt
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
RHODOSMS8_01286 (slt)
Enzymes [BR:
rbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RHODOSMS8_01286 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RHODOSMS8_01286 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_2
TPR_7
TPR_16
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AWZ00828
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All DBs
Position
1277810..1280551
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AA seq
913 aa
AA seq
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MGYREVSPSFASLKASALGLAVTFALSTAALGAVPVPLTKPTPPPPSDLLSEADGHALWD
GLDAREKGKWMEVRTFARQISDPTAKAILNWLRFQKEGTGSTVAEVVAFQEQYPHWPRQD
RLSRRAEEAISDYPMRDADVIAWFATRDPLTGEGKIRLGEALLNSGQQVEGATWIQRAWV
EHQFSRSREAEILKKYRPHLPPQAHEDRLNRLIWEQRFSDGRRMLQLVNAEARALADARL
KLASRSRGAESAVTRVPTSLRADAGLLFDHARYLRRRGQDQTAIPLLLTPPTATHSITRP
DRAWTERKILARKALTEGHYQEAYGLATGHGHDRGVAFAEGEFLAGWIALQYLNDADRAF
VHFQTLAAGVKTPISKSRGSYWMGRAAEARGRTDEALGYYRQASSYPTTFYGQLATSRLS
SGGGALLQLPTAPSPTAAHSGALAANDMVRAFELMNEAGEDSLARSFVIELANTLQDATA
LAALADLMVERDLPNLSVRVAKIAAGRGISLPERSYPTAVLPAFTQVGKPVEPALVYGLS
RQESEFNPRAISHAGARGLMQLMPRTARAVARQIGVPYQRARLTDDPSYNATLGSAHLSD
LLDDFAGSYIMTIAAYNAGAHRVSQWVERYGDPRDPAVDPIDWMENIPFTETRNYVQRVI
ENVQVYRARLQGRAVDLKIEQDIARYDGSAPIIQTTPKPRTQLTPLAAPPTAPPPIAVPA
SPTVAALPSARRDIPAPNPTRQQVAPVQTPIPPVSVPPPAAPEAPAMTPPPVTPPAVSSL
PTPTLDAPADVTLTDGAMMPVVEEDDPSYRPPVVASPSPILEPAPQPALTATTPAAPSLI
PPAAPEAPVLTAPEPQPIARSTAPITLRPPPGIDAPRAPADFKPTQQVIVQPTAPSTQEP
GTMLPIADDKLGG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatcgcgaggtgagtccatcttttgccagtctgaaagccagcgcattaggccta
gcggtcacttttgcgcttagcacggctgcgcttggcgctgttcccgttcctttgaccaaa
ccaacgccacctccgccctcagatttattaagtgaggcggacggccatgcgctgtgggat
ggtcttgatgcgcgggaaaagggcaaatggatggaagtccgcaccttcgcccgacagatc
agcgacccaaccgcaaaggccattctcaactggctgcgcttccagaaggaaggaaccgga
tccacagtcgcggaggtcgtcgctttccaggagcaatatcctcactggccacgccaggac
cgtctctcaagacgcgcagaagaagccatatcggactatccgatgcgcgacgcagacgtc
attgcctggtttgcaacccgtgatccgcttaccggtgaaggcaagataaggttgggcgaa
gcccttctgaacagtggtcagcaagtcgaaggtgcgacatggattcagcgcgcctgggtc
gaacatcagttctcccggtcaagagaagctgaaatcctcaagaaataccgaccccatctg
ccgcctcaggctcatgaagaccggctcaatcgcctcatctgggagcagcgtttctccgat
ggccgccggatgctccagctggtcaatgcagaagcccgcgcactggcggatgcgcgcctg
aagctcgcatcccgctcccgcggcgctgaaagcgctgtcacgcgcgtgccaacaagtttg
cgggccgatgctggccttctctttgatcatgcacgttatttacggagacgcggccaagac
cagacggcaattccgcttctcctgacgccgcccactgccacccattccattacccggccc
gatcgcgcatggacagagcgaaaaatccttgcccgaaaagcacttacagaaggtcattac
caggaagcttacggtcttgcgactggccacggtcatgatagaggtgttgctttcgccgag
ggcgaattcctcgcaggctggatagcgcttcaatatctgaacgatgccgacagagctttt
gtgcatttccagaccctggcagcaggcgtcaaaacacccatcagcaaatcccgcggctct
tattggatgggtcgggccgccgaagcacgtggtcgtaccgacgaagcactcggctattac
aggcaggccagcagctacccaaccactttctatggtcaattggcgacatcacgcctgtct
tcaggtggcggcgcgctcctgcagctgccgactgcgccttctccgacggcggcccacagc
ggcgcccttgctgccaatgacatggttcgtgccttcgagctcatgaatgaagccggtgag
gacagtcttgcccgcagtttcgtcatcgagctggcaaatacacttcaagatgcaaccgca
cttgctgcattggcggacctgatggtcgaacgggatcttccaaatctgtcggtacgggtc
gccaaaatcgctgccgggcgaggcatctcactgccagaacgaagctatccgaccgcggtg
ctcccggcctttacccaggtgggcaaaccggttgaaccggcactggtctatggcctctct
cgccaggaaagcgagttcaacccgcgcgccataagtcacgctggggccaggggcctcatg
cagctcatgccaaggaccgcccgcgccgtcgcacgccaaattggtgtgccctatcaacgc
gcccgcctcaccgacgatccgagctacaatgccacactagggtctgcgcacctgagtgat
ttgctggatgattttgcaggctcctacatcatgaccatcgcggcctataatgctggcgcg
caccgtgtgtcccaatgggttgagcgctatggcgacccccgcgacccggccgttgatccc
attgactggatggagaacatccctttcacagagacccgcaactatgttcagcgcgtcatt
gaaaatgtgcaggtctaccgggcccgccttcaaggccgggcggtcgatctgaagattgaa
caggatatcgctcgctacgatggctccgcccccattatccagacaacaccaaagccccgg
acccaactaaccccactcgctgcgcctccaacagcgcctcccccgattgccgttccagca
tcacccacagtggctgcattaccttcagcaaggcgtgatattcccgcgccaaatcccact
cgccaacaagtggctccggtgcaaaccccaattcctccggtttctgtgccaccacccgct
gcaccagaagcccctgcgatgacaccgcctccagttacaccgccagcagtctcaagcttg
ccgacgcctactctggatgcgccagccgacgtcaccctcacagacggggcaatgatgccg
gtcgtggaggaagatgatccgagctatcgcccacctgttgttgcaagcccgtcacccatc
ttggaaccagcgcctcaaccagctctcacagcaacgacgccagccgcgcccagtctaatt
ccaccagcggctccagaagcaccggtgttaacggctcccgagcctcagccgatagcccgc
agcactgcaccgatcactctgcggcccccgcctggaattgacgccccgagagcaccagct
gacttcaaaccgacccaacaggtcattgtacagcccacagcgccctcgacccaggaaccg
ggcacaatgttgcccatcgccgatgacaaattaggcggctaa
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