Rhodobiaceae bacterium SMS8: RHODOSMS8_01395
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Entry
RHODOSMS8_01395 CDS
T05596
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHODOSMS8_01395 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbs03021
]
RHODOSMS8_01395 (rpoA)
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_01395 (rpoA)
Enzymes [BR:
rbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHODOSMS8_01395 (rpoA)
Transcription machinery [BR:
rbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHODOSMS8_01395 (rpoA)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHODOSMS8_01395 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
AWZ00935
UniProt:
A0A2Z4UJD9
LinkDB
All DBs
Position
complement(1387830..1388846)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWEELIKPTKLEIQSGHDAQRTATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
AVQIDGVLHEFSSIAGVREDVTDIILNIKQLALNLHSEGPKRMMLVKQGPGIVTAGDIEA
GSDIEILNPELVLCTLDEGADIRMEFVVSNGKGYVAADRNRPEDAPIGLIPVDSLYSPVR
RVSYKVENTREGQILDYDKLTVQLETDGSVTPEDAVAFAARILQDQLQVFVNFDEPKEVV
VEEQHPELEFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTESEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVASWPPENIEDLAKRFEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaactgggaagagctcattaaaccgaccaagctggagatccagtctggt
catgatgcacagcgtacggcaacggtagttgctgagccgcttgagcgtggctttggtctg
acgctaggcaatgcgctgcgccgcgttctgttatcctcactgcagggtgctgcggtgacg
gctgttcagattgacggtgtgttgcacgaattttcatccattgccggcgttcgtgaagat
gtcactgacatcatcttgaacatcaagcaactggcgctgaaccttcacagcgaaggtcct
aagcggatgatgctcgtaaagcagggccctggtattgtcactgctggcgatatcgaagct
gggtcagatatcgaaattctgaaccctgagcttgtgctttgcacgctcgatgagggtgcg
gacattcgcatggagtttgttgtcagcaatggtaagggctatgtggccgcagaccggaac
cgtccggaagatgcgccgatcggtcttattccagtcgacagcctttacagcccggttcgc
cgtgtttcctacaaagtggaaaacacacgcgaaggccagatcctcgactatgacaagttg
actgttcagcttgaaacagacggatctgttacaccggaagacgctgtcgcctttgctgcg
cgtattttgcaggaccagcttcaggtcttcgtcaactttgacgaaccgaaggaagttgtt
gtcgaagagcagcatccggagcttgagttcaacccggctcttcttaagaaggtcgatgag
cttgaactgtctgtccgttcagcgaattgcctgaagaacgacaacattgtctatattggc
gacctgatccagaaaacagagtccgagatgcttcgcaccccgaactttggccggaaatcc
ctgaacgagatcaaagaagttctcgcgcagatggggcttcacctcggcatggaagtggct
agctggccgcctgagaatatcgaagatctcgcgaaacgtttcgaagatcattactga
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