Rhodobiaceae bacterium SMS8: RHODOSMS8_01898
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Entry
RHODOSMS8_01898 CDS
T05596
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00470
D-Amino acid metabolism
rbs00550
Peptidoglycan biosynthesis
rbs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHODOSMS8_01898 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHODOSMS8_01898 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
RHODOSMS8_01898 (murD)
Enzymes [BR:
rbs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RHODOSMS8_01898 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
Precursor biosynthesis
Amino acid ligase
RHODOSMS8_01898 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
DAO
NAD_binding_2
Pyr_redox_3
ApbA
NAD_Gly3P_dh_N
NAD_binding_7
NAD_binding_8
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AWZ01431
UniProt:
A0A2Z4UKG2
LinkDB
All DBs
Position
complement(1916417..1917838)
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AA seq
473 aa
AA seq
DB search
MIAARAYKDRKVAVYGLGASGLAVARALVKGGAKVTVWDDGEGQRAKAEAANLSVSDPCV
EGLEGYAALILAPGIPLTHPEPHQVVRLAQGAGVPVLGDVELFQHEVRALNPEAKIVAIT
GTNGKSTTTALIGHMVTANGRRAEVGGNIGKAVFDLDAPRSDTVYVIEVSSYQIDLAPTL
RPDVGVLLNITPDHIDRHGTLEHYASVKARLFQFQKANDVAVVGIDDDLTSEICSAVCGK
GTATLVPVSTAKSLSRGVCVLDGVLYDSGSGKTDRVGDLKELKTLAGQHNWQNAAAAYSV
GRSLGFPADRILHSFRSFPGLAHRMEIIAETEGVLFVNDSKATNAEAAAKALGAYDTIYW
IAGGVPKEGGIDSLSPLFPCVEKAYLIGEAADAFGASLEGQVPYVATGALDAAVAAAVRD
AMSASRAGRHGVVLLSPACASFDQFKNFEVRGDAFREMVHAALKAIGNGGEAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgattgctgcgcgcgcatataaggaccgtaaggtcgccgtttatggactcggagcgtct
gggttagcggttgcgcgcgcgctggtcaaaggtggcgcgaaggtgacggtctgggacgat
ggtgaaggtcagcgcgccaaggcggaagctgcgaacctctctgtctctgatccttgcgtt
gaaggccttgaggggtatgcggcgctcatccttgcgcctggtatccctcttacccatccc
gaaccgcatcaggttgtgcggcttgcccagggtgccggcgtgccggtgctcggggatgtc
gagctctttcagcatgaggtgcgcgcgcttaacccggaggcaaaaattgttgcgatcacg
gggacgaatggaaaatcgaccacaaccgcattgatcggacacatggtcaccgccaatggg
cggcgtgcggaagttggtggcaatatcggcaaggcggtctttgatctcgacgcgcctcgg
tctgataccgtctatgtgattgaggtttcctcatatcaaatcgatcttgcgccgaccttg
cggccagatgttggtgtgcttctcaatatcacacctgaccatattgatcgtcatggaaca
cttgaacactacgcctcggtcaaagcgcgtctgtttcagttccagaaggcgaatgatgtc
gcggtggttgggatcgatgatgatctgacttccgagatttgttcggctgtctgcggaaag
ggcacagcgactctggtccctgtttcgacagccaagtctcttagccggggcgtttgtgta
ctggatggtgttctctatgacagcggatcagggaagacagaccgggtcggcgacttaaaa
gaactgaagacacttgcggggcagcacaattggcagaatgccgctgctgcctattccgtc
ggacggtctttgggttttcctgctgaccgtattctgcattctttccggtcttttcccggt
cttgcccatcgcatggagattatcgctgagaccgagggtgtcttgttcgtcaatgacagc
aaggcgaccaatgcggaagctgctgcgaaggcgctcggtgcatatgacacaatttattgg
atcgctgggggggttcccaaagaaggcgggattgactccttgtctccgctctttccatgt
gtcgaaaaggcctatttgattggtgaggcggctgatgcatttggcgcttctttggagggc
caggtgccgtatgttgctacaggtgctcttgacgccgctgttgctgcggctgtccgcgat
gcgatgagtgcatcacgcgctggccgtcacggtgttgttcttctatctccggcctgtgca
tcctttgaccagttcaaaaatttcgaagtacgcggtgatgcctttcgcgagatggtgcac
gctgctcttaaagctattggaaatgggggagaagcagcatga
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