Rhodobiaceae bacterium SMS8: RHODOSMS8_01995
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Entry
RHODOSMS8_01995 CDS
T05596
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbs03000
]
RHODOSMS8_01995 (gabR)
Transcription factors [BR:
rbs03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RHODOSMS8_01995 (gabR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AWZ01525
LinkDB
All DBs
Position
2011534..2013024
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AA seq
496 aa
AA seq
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MGQSIALVEPINLDRNGDRPLQWQLYESLRLAILDGRLTAGQRLPSSRALANDLALGRNT
VVAAYEQLAAEGYVLSRTGAGTEVAALPPETVLEVGRSETQNRQQDPRRHLSNRGEATIA
IKRASPRYEKLAALPFQHGLPAMDSFPRDTWARLLARRARQPQSRLYDYQFGPGFPALRE
AIAAYLGAARGVVCGPDNVIVTAGAQAALDLAARMTLDPGDPVWIEDPGYLGARGALQSA
GANLIPVPVDKEGMNPDALPEGTKDPKLIYVSPSYQFPLGVTMSLNRRLALLERAKETGA
WILEDDYDSEYRYTGRPLAALQGLDGTGGVIYMGTFAKTLFPALRVGYLVVPDSLIDAFT
NAIRMTGQSPAPAIQAALADFMDDGHFTAHIRRMRTLYAGRQQHLIDALKRETGDMFTVP
KLEGGMQLAAYLSDDADDVKAAEAVNAARVFTTPLSGYYLKDAPKRGLYLGYAGVLESDI
DRAAKKLGRAMIDAGF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatccatcgcactggttgaaccgatcaatctcgaccgcaatggcgaccgaccg
ctgcagtggcagctctatgaaagcctacgccttgcgatcctggatgggcgcctgaccgca
ggccaacgcctgccatcgagccgcgctcttgcaaacgatctggcactcggcagaaacact
gttgtcgccgcctatgaacaattggccgcggaaggctatgtgctctcgcggaccggggcc
ggaaccgaagtggcggccttgccccccgagacagtgttggaagtaggccgaagcgaaaca
caaaaccggcagcaagacccacggcgtcatctctccaatcggggcgaggcgaccatcgcc
atcaagcgcgccagtccccgctacgaaaaactcgccgccctccccttccagcatggtctc
cctgcgatggattcttttccacgcgatacctgggcgcggcttctggcgaggcgcgcccgc
cagccccagtcccgcctctatgattatcagttcgggccgggcttcccggcgttgcgtgaa
gcgatagctgcttatctcggcgctgcgcggggtgtcgtgtgcggaccggacaatgtgatc
gtcacggcgggtgcccaagccgccctcgatctcgccgcccgcatgacattggaccccggc
gatcccgtctggattgaagaccctggatatctcggtgcccgcggcgcgctgcaaagcgct
ggcgccaatctcattcctgtgcctgtcgacaaagaaggcatgaacccggacgccctgcca
gagggaacaaaagacccgaaactcatttacgtgtcgccgtcctatcaattcccgttgggc
gtcaccatgagcctcaaccgccgcctggccttactcgaaagggcaaaggaaaccggcgcc
tggattcttgaagacgattatgacagcgagtatcgctacacaggtcgtccgcttgcggcg
ctgcaaggtctcgatggcaccggtggcgtcatctacatgggcacattcgcgaagaccctg
ttccctgcgcttcgcgtcggctacctcgtggtacctgacagcctgatcgatgcattcacc
aacgccatccgcatgaccggccagagcccggcacccgccattcaggcagcgctcgcagac
tttatggatgatggtcacttcacggcccacattcgccgcatgcgcaccctatatgccgga
cgccaacaacatctgatcgacgcgctgaagcgcgagaccggtgatatgttcaccgtgccg
aagcttgaaggcggcatgcagctcgcggcttatctgagcgacgatgcagatgacgtcaaa
gcggcagaagcggtgaacgctgcccgtgtcttcaccacgccgctgtctggctactatctc
aaagacgcgccgaaacgcggcctctatctgggctatgcaggtgtgctggaaagcgatatt
gaccgcgccgccaaaaagctcggccgcgccatgatcgatgctggtttttaa
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