Rhodobiaceae bacterium SMS8: RHODOSMS8_02829
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Entry
RHODOSMS8_02829 CDS
T05596
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHODOSMS8_02829 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_02829 (priA)
Enzymes [BR:
rbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHODOSMS8_02829 (priA)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHODOSMS8_02829 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
TetR_N
Zn_ribbon_6
SpaA_3
AAA_30
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AWZ02343
UniProt:
A0A2Z4UMP0
LinkDB
All DBs
Position
complement(2856485..2858698)
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AA seq
737 aa
AA seq
DB search
MPSEFSDSDLFKDEAPQKQRVVSVLLPLGIPGPYDYSVPDTLNVGTGDYVTVPLGPREVL
GVVWGEGSGEVGHNRLKSIIDKLDAPPMTHALRQFVDWIAVYTLSPPGAVLRLAVRVPGA
LEPAGVRTVYRLGGPPPGRMTPGREKVLELAKDGFARTTREIADEAGVSPAVVRGLIDAG
TFEAVELPADAPFDEPDLARVGANLSEDQQFAADQLTTRIEQGGFSAQLLDGVTGSGKTE
VYFEAVAAALAKGRQALILLPEIALTGQFLQRFEARFGCRPAEWHSDLSTKERKRVWRAV
ADGTAKAVVGARSALFLPYPDLGLIVVDEEHESAFKQEEGVSYNARDMSVVRGSLGGFPV
VLASATPSLETMANVWSGKYDHLVLPERHGPAVMPAVGAIDMRAHPPEKGEWISPPLVRE
IAEALSKGEQSMLFLNRRGYAPLTLCRTCGHRIGCPECDSWLVEHRFRKELTCHHCGYSA
PVPRACPSCNDEDALIACGPGVERIAEEVVQKFPEARLALLSSDSLRGPAAHTEAIRQIT
DHEVDVIVGTQIVAKGHNFPLLTVVGVVDADLGLENGDLRAGERTFQLLHQVAGRAGRAD
RPGRVYLQTYMPEHPVMQALIQGERDRFLEREASMRERTGYPPYGRLVGIVVSGPNPQQV
HGVSRELARSHASQEGISVFGPAPAPLALLRGRHRVRFLVKSTRNVPIQDYVADWLSRVK
VPNAVRVSVDVDPYSFL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgaattttcagacagcgatctttttaaggatgaagcgccccagaagcagcgg
gttgtctccgttctgttgccgctcggcattccgggaccttatgactattcggtgcctgac
actctcaatgttggcacaggtgactatgtgactgtgcctttggggccacgggaagtgctc
ggtgtcgtttggggtgaaggcagcggagaggtcggtcacaatcgattgaaatcaattatc
gacaaacttgatgcgccccccatgacccatgcgctccgacagtttgttgattggattgcg
gtctacaccttgtccccgccaggtgctgtgttgcgtttggcggttcgggtgccgggcgcc
ttggagcctgctggtgtgcggactgtgtatcggcttggtgggccgccgccagggcgtatg
acgcctggcagggaaaaagttctggagctggcgaaggatggtttcgcgcggacaacgcgg
gagattgcagacgaagcgggtgtctctccggcagttgttcgcggtcttatagatgcaggc
acatttgaagcggtggagcttcccgctgatgctccctttgatgagccggatttggcgcgc
gtgggcgcgaacctgtctgaagatcaacaatttgcagcagaccagctgaccacgcgtatt
gagcaaggcgggttttcagcgcagctcttggatggcgtgactgggtccggcaagaccgag
gtttattttgaagcggttgcggcggctttggcaaaagggcggcaggccttgatcctgctg
ccggaaattgcgctgacgggacagtttttgcagcggtttgaggcgcggtttggttgtcgc
ccggcggaatggcactcagatctttccaccaaagagcgaaagcgtgtctggcgggctgtc
gcggacggaacggcaaaagctgtggtgggcgcgcgctctgccctttttcttccctatccg
gacttggggctcatcgtggtggatgaagagcatgaaagtgcgttcaagcaggaagagggc
gtttcctacaatgcgcgggatatgagtgtggtgcggggatcgctcggtggtttccccgtt
gtgctggcgtctgccacgccgtcccttgaaaccatggcgaatgtctggtctggcaaatat
gaccatctggttctgcctgagcggcatgggcctgcggtgatgcccgctgtcggggcgatt
gatatgcgcgcgcacccgcctgaaaaaggtgagtggatttcgcctccgcttgtaagagag
atagcggaagcgctctcaaagggtgagcaatccatgctgttcctcaaccggcggggatat
gcaccgcttacgctgtgccggacgtgcgggcatcggattggctgccctgaatgcgattct
tggctcgtggagcaccggtttcgcaaggaactgacatgccaccattgtggctactccgcg
cctgtgccgcgtgcgtgtccctcctgcaatgatgaggatgcgcttattgcgtgcggtcca
ggcgttgagagaatcgctgaggaagtggttcagaaattcccggaggcacggttggctctc
ctgtcgtctgacagtcttcgcgggcctgcagcgcatacagaagcgatccggcagattacg
gatcacgaagttgatgtgattgtggggacccagatcgtggcgaaagggcacaactttccg
ttgttgacggttgttggcgtggtggatgcggatctggggcttgagaatggcgatctgcgc
gcaggcgagcgcactttccagctgcttcatcaggtggcagggcgtgctgggcgcgctgat
cggccgggccgggtttatctccagacctatatgcccgagcacccggtcatgcaggccctt
atacaaggagagcgggaccgattccttgagcgggaggcttccatgcgggagcgtaccggc
tatccgccctatgggcgtctcgtaggcattgttgtctcaggccccaatcctcaacaggtg
catggtgtttcccgtgagctcgcccggtcgcatgcctcccaagagggaatcagcgtcttt
ggccctgctcccgcgcctctcgcactcctccgcggccgccaccgggtccgattcctggtg
aaaagcacccggaacgtgccgatccaggactatgtggcggactggctgtcgcgggtaaag
gtgcccaatgcggtccgagtctcagtggatgtggatccctattctttcctttga
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