KEGG   Rhodobiaceae bacterium SMS8: RHODOSMS8_02833
Entry
RHODOSMS8_02833   CDS       T05596                                 
Symbol
lpd3
Name
(GenBank) dihydrolipoyl dehydrogenase 3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rbs  Rhodobiaceae bacterium SMS8
Pathway
rbs00010  Glycolysis / Gluconeogenesis
rbs00020  Citrate cycle (TCA cycle)
rbs00260  Glycine, serine and threonine metabolism
rbs00280  Valine, leucine and isoleucine degradation
rbs00310  Lysine degradation
rbs00380  Tryptophan metabolism
rbs00620  Pyruvate metabolism
rbs00630  Glyoxylate and dicarboxylate metabolism
rbs00640  Propanoate metabolism
rbs00670  One carbon pool by folate
rbs00785  Lipoic acid metabolism
rbs01100  Metabolic pathways
rbs01110  Biosynthesis of secondary metabolites
rbs01120  Microbial metabolism in diverse environments
rbs01200  Carbon metabolism
rbs01210  2-Oxocarboxylic acid metabolism
rbs01240  Biosynthesis of cofactors
Module
rbs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rbs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rbs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rbs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rbs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RHODOSMS8_02833 (lpd3)
   00020 Citrate cycle (TCA cycle)
    RHODOSMS8_02833 (lpd3)
   00620 Pyruvate metabolism
    RHODOSMS8_02833 (lpd3)
   00630 Glyoxylate and dicarboxylate metabolism
    RHODOSMS8_02833 (lpd3)
   00640 Propanoate metabolism
    RHODOSMS8_02833 (lpd3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RHODOSMS8_02833 (lpd3)
   00280 Valine, leucine and isoleucine degradation
    RHODOSMS8_02833 (lpd3)
   00310 Lysine degradation
    RHODOSMS8_02833 (lpd3)
   00380 Tryptophan metabolism
    RHODOSMS8_02833 (lpd3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RHODOSMS8_02833 (lpd3)
   00670 One carbon pool by folate
    RHODOSMS8_02833 (lpd3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rbs04147]
    RHODOSMS8_02833 (lpd3)
Enzymes [BR:rbs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RHODOSMS8_02833 (lpd3)
Exosome [BR:rbs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RHODOSMS8_02833 (lpd3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored NAD_binding_8 AlaDh_PNT_C HI0933_like DAO Thi4 3HCDH_N FAD_binding_3 RPA Lycopene_cycl
Other DBs
NCBI-ProteinID: AWZ02347
UniProt: A0A2Z4UME7
LinkDB
Position
complement(2861273..2862676)
AA seq 467 aa
MSDTFDLIVIGAGPGGYECAIRASQLGMSVACVEKRDALGGTCLNVGCIPSKALLHASEL
FAETDHFEKMGINVGKPKLDLKVMQSFKQQAIDGNTQGIEFLFKKNKIEWVKGTGTLKGA
GEVEVALTEGGSRILKASDIVLATGSDVAQLPGIDVDEKQIVSSTGALELEKVPGKLVVV
GGGVIGLELGSVWNRLGSDVTVVEFLPAILPGMDGEVAKTFQRILKKQKFSLKLGSKVTG
VEKSGKGLKVSIEPAKGGDTEVLDADVVLVCIGRVAYTEGLGLDKAGVEVDERGRIKVDA
HLKTNVDGVHAIGDAITGPMLAHKAMEEGVVLAERLAGQMPHMNYDVIPGVVYTQPEVAS
VGKTEEELKEAGIDYRAGKFPFTANGRAKANQQTDGFVKILADKKTDKVLGVHIIGTQAG
EMIHEAVTVMEFGGAAEDIARTCHAHPTLSEAVKEAALAVDGRPLHM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtccgacacgttcgatcttattgttatcggtgcaggccctggcggctatgaatgtgca
atccgcgcgtctcaattggggatgagcgttgcgtgcgttgaaaaacgtgatgcacttggt
ggaacctgcctcaatgttgggtgcatcccctcaaaggcgctgcttcatgcgtcagagctt
tttgctgagaccgaccattttgaaaaaatgggcatcaatgttggtaagcccaagctcgac
ctcaaagtcatgcagagttttaagcagcaggcgattgatgggaatacgcaaggcatcgaa
ttcctgttcaagaaaaacaagattgaatgggtaaagggcacaggaacactcaaaggtgcc
ggcgaagttgaagtcgcccttactgaaggtggatcgcggatactgaaggcgtctgacatt
gtgctggcgacagggtccgatgtcgcgcagctgcctggtattgacgttgatgaaaaacag
attgtctcctcaactggtgcactggagcttgagaaagttccgggcaagctggttgtcgtc
ggcggcggtgtgattggtctggagcttgggtctgtttggaatcgcctcgggtccgacgtc
acagttgttgaattcctgcctgcaattctgccgggtatggatggagaagtggcgaagacc
ttccagcgaattctgaagaagcagaaattttctctaaagcttggctccaaagtgactggc
gttgagaagagtggaaaaggtctcaaggtatctattgagcctgccaagggtggcgacacg
gaagttttagatgctgacgtggttttggtttgcatcggccgggtcgcttacaccgaaggt
ctcgggctcgacaaggccggtgttgaggttgatgagcgcggtcgcatcaaagtggacgcg
catctcaaaaccaatgtggatggtgtgcacgcaattggcgatgcgatcacggggcctatg
ctcgctcacaaggcgatggaagaaggtgtggtcctggctgagcgactggcgggccaaatg
cctcatatgaattacgatgttattccaggcgttgtgtatacgcagccggaagtggcaagt
gtcggtaagaccgaagaagaattgaaagaagccggtattgactatcgcgcaggaaaattc
cccttcaccgcaaacgggcgtgcgaaagccaaccagcagacagacggctttgtgaaaatc
ctggcggacaaaaagaccgacaaggttttgggtgttcacattatcggcacgcaggccggt
gagatgatccacgaggctgtgacagtgatggaatttggcggcgctgcggaagatattgcg
cgcacctgccatgctcacccaacattgtctgaagctgtcaaagaggcagcgcttgcagtg
gatggtcgccccctgcacatgtaa

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