Rhodobiaceae bacterium SMS8: RHODOSMS8_03120
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Entry
RHODOSMS8_03120 CDS
T05596
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03030
DNA replication
rbs03430
Mismatch repair
rbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHODOSMS8_03120 (dnaQ)
03430 Mismatch repair
RHODOSMS8_03120 (dnaQ)
03440 Homologous recombination
RHODOSMS8_03120 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbs03032
]
RHODOSMS8_03120 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_03120 (dnaQ)
Enzymes [BR:
rbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHODOSMS8_03120 (dnaQ)
DNA replication proteins [BR:
rbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHODOSMS8_03120 (dnaQ)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHODOSMS8_03120 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWZ02630
UniProt:
A0A2Z4UPA3
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All DBs
Position
3137941..3138633
Genome browser
AA seq
230 aa
AA seq
DB search
MREIVLDTETTGISPKEGHRLVEIGCVELENHMPTGETYHVYINPEREMSEGAFQVHGLS
DEFLADKPKFDEVADDFLAFVKDAPLVIHNASFDMGFLNHELKMVNKPLLPDAQAVDTLA
MARKKFPGGQNSLDALCRRFNVDNSNRVKHGALLDSELLAEVYLELIGGREPGLSLAAEA
VSGTDASGKISHVVRKQRPKPLGSRITDEERTAHQAFVATLGEETLWKDT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtgcttgatacagaaacgacggggatcagtccgaaagaaggccaccgt
ctggtggagatcggctgtgtggaacttgaaaaccacatgcccaccggcgagacctatcac
gtctatatcaatcccgaacgtgagatgtccgaaggggcatttcaggtccatggcctgtct
gacgaattcctcgccgacaaaccaaaattcgacgaagtcgccgatgacttcttggctttt
gtaaaagatgcgccgctcgttattcacaatgcgtcctttgatatgggctttttgaatcac
gaactgaaaatggtgaacaagccactgctgcctgatgcccaggctgtcgacacactggcc
atggcacggaaaaaatttcccggtggccagaacagtctcgacgcgctttgccgccgcttc
aatgtcgacaattcaaaccgggtaaagcacggcgcgcttctcgacagcgaattgctggca
gaggtctatctggaactcattggtggtcgcgagccaggtctgagccttgctgccgaagcg
gtcagcggcacagatgccagcggcaagatcagccatgtggtgcgcaaacagcggccaaag
ccactcgggtctcgcatcaccgacgaggaacgcactgctcatcaggctttcgtggcgacc
cttggcgaagaaacgctctggaaagacacctag
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