Rhodobiaceae bacterium SMS8: RHODOSMS8_03248
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Entry
RHODOSMS8_03248 CDS
T05596
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs03030
DNA replication
rbs03430
Mismatch repair
rbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHODOSMS8_03248 (dnaN)
03430 Mismatch repair
RHODOSMS8_03248 (dnaN)
03440 Homologous recombination
RHODOSMS8_03248 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbs03032
]
RHODOSMS8_03248 (dnaN)
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_03248 (dnaN)
Enzymes [BR:
rbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHODOSMS8_03248 (dnaN)
DNA replication proteins [BR:
rbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHODOSMS8_03248 (dnaN)
DNA repair and recombination proteins [BR:
rbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHODOSMS8_03248 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AWZ02758
LinkDB
All DBs
Position
3269455..3270567
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AA seq
370 aa
AA seq
DB search
MKITIERGALLKSLNHVQSVVERRNTIPILSNVLMRAGQGQLSLTATDLDIEVVEATTAD
IGQEGGTTASAHTLYDIVRKLPDGAQVEITDGEDGKLTLQAGRSRFALQALPQEDFPAMS
AGDLPHRFEMPAEALGRLIDKTRFAISTEETRYYLNGIYLHMVEDGAPMLRAVATDGHRL
AQADFPLPDGAAGMPGVIVPRKTVLELQKLVEEEEGIVRIGVSDTKIRFEFGGVVLTSKL
IDGTFPDYTRVIPEGNDKDMEVDGKKFAEAVDRVSTISTERSRAVKLNMEEGRLILTVTN
PDSGSATEELGVAYSSDALEIGFNARYLLDIAGQLDGDKAIFSLADSGSPTVIRDVDDES
ALYVLMPMRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacaattgaacgcggtgcgctcttaaagtcgctcaatcatgtgcaaagtgtc
gtcgaacgccgcaacacaatcccgatcctatcgaatgtgctgatgcgcgcaggtcagggc
cagttgagcctcaccgcgacggacctggatattgaagttgtcgaagcaaccacagctgac
attggtcaggaaggtggcaccacggcgtccgctcatacgctctatgacatcgtccgcaaa
ctacccgacggcgcccaggttgaaatcacagacggcgaagatgggaagctcactcttcag
gcggggcgttcacgctttgcgctccaggcattgccgcaggaagatttcccggccatgtca
gcaggcgatttaccgcatcgttttgaaatgccggcggaagccttggggcgtttgatcgac
aagacacgctttgccatctccacagaagagacacgctattatctaaacggcatctacctg
cacatggtggaagatggggcgcccatgctccgcgccgtggcgacagacggtcaccgtctg
gcgcaggcagactttcccttgccagacggcgccgcaggcatgcctggtgtcatcgttccc
cgcaagaccgtcctcgagcttcaaaagctggtggaagaggaagaaggcattgttcgcatc
ggcgtatcggacacgaaaatccgcttcgaatttggcggcgtggtcctgacgtcaaagctg
atcgatggcaccttccctgactacacgcgggtcattccggaaggcaatgacaaggacatg
gaagtagacggcaaaaaatttgccgaggctgttgaccgtgtctcaaccatttcgaccgag
cgctctcgcgcggtgaagctcaatatggaagaagggcggctcattctgaccgtcaccaat
ccagacagcggcagcgccacggaagagctgggagttgcctatagctctgatgccctggag
atcggcttcaacgcccgctacctgctcgacattgccggtcagctcgatggggacaaagca
atcttctctttggccgatagcggctctccaacagttattcgtgatgtcgacgatgaatca
gcgctctacgtgctgatgccgatgcgtgtctag
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