Rhodobiaceae bacterium SMS8: RHODOSMS8_03505
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Entry
RHODOSMS8_03505 CDS
T05596
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbs03016
]
RHODOSMS8_03505 (rnd)
Enzymes [BR:
rbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RHODOSMS8_03505 (rnd)
Transfer RNA biogenesis [BR:
rbs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHODOSMS8_03505 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWZ03010
UniProt:
A0A2Z4UQH0
LinkDB
All DBs
Position
complement(3566817..3567482)
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AA seq
221 aa
AA seq
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MGVRRKNGFAPYGNTRTGMSITLHKGDLPADLDFGASVAVDSETLGLQIPRDKLCLVQLS
AGDGNAHIVQLDRARYDAPNLRALMANPEVTKIFHYARFDVAVMQQYLGVVTTPIYCTKI
ASKLVRTYTDRHGLKDLCRELAGVEISKQQQSSDWGAETLSEAQLSYAASDVLHLHKLKT
VLDDMLEREGRMEYAKACFAFLPVRASLDLAGWPDEDIFSH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgccgcaaaaacgggtttgccccttacggcaacacgagaaccggcatgagc
atcacactccataaaggcgaccttccagcggacctcgatttcggcgcttccgtcgcggtt
gatagtgagacgttgggcttgcagatcccccgggacaagctgtgtctggtacagctgtcc
gccggtgacggaaacgcccatatcgttcagctcgacagagcgcgctacgacgccccaaac
ctgcgtgccttgatggcaaatccggaagtcacgaagattttccactatgcccggtttgat
gtcgcggttatgcagcaatatctgggtgttgtgacgaccccgatttattgcaccaaaatc
gcttcaaagctggtgcgcacctatacagaccgtcacgggctgaaagacttgtgccgagag
ctcgctggagtagagatttccaaacaacagcagagttccgattggggggctgaaacgctg
tcagaggcccaattgtcctatgccgcatcagatgtgcttcacctgcacaagctgaaaaca
gtgctcgacgacatgctggagcgcgaaggccgtatggaatatgccaaggcctgcttcgcc
tttttgccagttcgggcgtcgctggaccttgccggatggcccgatgaggacattttctct
cactaa
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