Rhodobiaceae bacterium SMS8: RHODOSMS8_03584
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Entry
RHODOSMS8_03584 CDS
T05596
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00300
Lysine biosynthesis
rbs01100
Metabolic pathways
rbs01120
Microbial metabolism in diverse environments
rbs01230
Biosynthesis of amino acids
Module
rbs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHODOSMS8_03584 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbs01002
]
RHODOSMS8_03584 (dapE)
Enzymes [BR:
rbs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RHODOSMS8_03584 (dapE)
Peptidases and inhibitors [BR:
rbs01002
]
Metallo peptidases
Family M20
RHODOSMS8_03584 (dapE)
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Ortholog
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
DUF1547
Motif
Other DBs
NCBI-ProteinID:
AWZ03085
UniProt:
A0A2Z4UQA3
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Position
complement(3635922..3637100)
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AA seq
392 aa
AA seq
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METDTPTAAGLIDPVSLAQDLIRCQSVTPVEGGALDFLEARLTELGFVCTRLPFSDQDTP
DVDNLYARLGSEAPNFCFAGHTDVVPVGDAKAWSVDPFEAVIKDGLLLGRGATDMKGSIA
AFAAAASRLVTDGGVKGSISFLITGDEEGPAINGTRKVLEWLEARGEVIDDCLVGEPTNP
QELGDMIKIGRRGSTNGWITAFGAQGHVAYPHLADNPTPRLVAMLQRLTSDLLDEGTDHF
QPSNLEITQISVDNEATNVIPAEAKARFNIRFNDLHTPDELEARVRAHLDAVTAEMGGAY
DLNMIASGDAFLTAPGKLSTLISDATTQATGRTPELSTSGGTSDARFIKNYARVVEFGLV
SQSMHKVDEHAKVDDIVALADIYETVLRGYFR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgatacacccacggcggctggcctgattgacccagtctccctcgcgcaagac
ctgatccgctgtcaaagcgtcacccctgttgagggcggcgcacttgattttctggaggcc
cgtctcactgagctggggttcgtctgcacgcgccttccgttcagcgatcaagacacgccg
gacgtcgacaatctttatgcccgtcttgggtccgaggcccccaatttttgctttgctggg
cacaccgatgtcgtgccggtgggcgatgcgaaagcctggagcgtcgacccgtttgaggcc
gttatcaaagatggcctgttgctcggacgcggcgctacggacatgaaaggctcgattgct
gcctttgcagctgcagcatcacggcttgttaccgatggcggcgttaagggctccatcagc
ttcctcattaccggcgatgaagaagggccggcaatcaacggcacccgaaaagtgctggaa
tggctggaggcccgcggtgaggtgattgatgattgccttgtcggcgaacccaccaaccca
caagagcttggtgacatgatcaagatcggtcgccgcggcagcacaaatggctggattacg
gcatttggtgcccagggccatgtggcctatccacacctggctgacaatccgacgccgcgc
ctcgtggccatgctgcaacgcttaacgagcgatctgttggacgagggcacagaccatttt
cagccctccaatcttgagatcacgcagatcagcgtcgataatgaagcaacgaatgtcatt
cctgcagaagccaaagcgcggttcaatattcgctttaacgatctgcatactccagacgag
ctggaagcccgggtgcgtgcgcatctagatgctgtgaccgctgagatgggtggcgcctac
gacctcaatatgatcgcgagtggtgatgcctttcttactgccccaggcaagttgagcacg
ctgatatctgacgccacaacacaggcgacgggacgtacgccggaattatccacaagcggc
gggacgtcagacgcgcggtttatcaagaactatgcgcgggttgttgaattcgggcttgtc
agccagtccatgcacaaggtggatgaacatgcgaaggtcgacgacattgttgcccttgcc
gacatctacgaaactgtactgaggggctatttcaggtag
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