Rickettsiales bacterium Ac37b: NOVO_01840
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Entry
NOVO_01840 CDS
T03234
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rbt
Rickettsiales bacterium Ac37b
Pathway
rbt00250
Alanine, aspartate and glutamate metabolism
rbt00310
Lysine degradation
rbt00350
Tyrosine metabolism
rbt00650
Butanoate metabolism
rbt00760
Nicotinate and nicotinamide metabolism
rbt01100
Metabolic pathways
rbt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rbt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NOVO_01840 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NOVO_01840 (gabD)
00310 Lysine degradation
NOVO_01840 (gabD)
00350 Tyrosine metabolism
NOVO_01840 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NOVO_01840 (gabD)
Enzymes [BR:
rbt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NOVO_01840 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NOVO_01840 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NOVO_01840 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
DUF7588
Motif
Other DBs
NCBI-ProteinID:
AIL64764
UniProt:
A0A077FL28
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Position
365887..367350
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AA seq
487 aa
AA seq
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MSFLNSLNYKVLFKEKAYINGEWVSAMSNETVPVINPASGEIIGIVPSMDNNDVLIAINA
AHEAFREWKKYTAKERAKILRKWYELVIIHKDDLSKIMTAEQGKPLEEAIQEIEYAANFI
EWFAEEAKRTYGDTIPAPNSKQRIMVTTEPIGVVAAITPWNFPSSMVTRKVAPALAAGCT
IILKPSEETPFSALALAVLAEEAGIPKGVINIVTGHPQSIGAELTTNPKIRKLSFTGSTE
IGRLLISQCASTIKRMSMELGGNAPCIVFDDADLKLAAQGIIASKYRANGQTCICINRVF
VHAKIYDKLLALLVEHVKSLKVGNGFEKGVKLGPLISAQAVSKVERLLGDAINKGGKVVL
GGNRIRGHGYFFEPTIVVNASDEMECFVEEIFGPITVLYSFNSEEEVVKRANNTIYGLAA
YVYTNDISRMYRITENLEYGMVGINNTSISNEVAPFGGIKQSGFGREGSYMGIKEFQNIK
YICVGNI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttttaaattctttaaattataaagtcctgtttaaggaaaaagcctatattaac
ggtgaatgggtttctgcaatgagtaatgagactgtccctgtgattaatcctgcaagtggt
gaaattataggtatagtaccgagtatggataataatgatgtattaattgctattaatgcg
gcacatgaagcatttagggagtggaaaaaatatactgctaaagaaagagcaaaaatttta
cgtaaatggtatgaattagtgattatacataaagatgatttatctaagataatgactgct
gaacaggggaagcctctagaggaagctattcaggaaatagaatatgcagcaaattttata
gaatggtttgctgaggaagctaaaagaacttatggagatactattccagctccaaatagt
aagcaaagaattatggtaactacagagccaataggggtagtagctgctattacgccttgg
aatttcccatctagtatggttactagaaaggtagctccagcactcgctgcgggctgtaca
ataattttgaaaccttctgaggaaacccctttttctgcacttgcgcttgctgtgcttgca
gaagaagctggtataccaaaaggggtaattaatattgttacaggtcatcctcagtctata
ggagcagaattaactactaatcctaaaattcgtaaattaagctttactggttctacagaa
ataggtaggttattgattagtcaatgtgcctctacaattaaacgtatgtcaatggagcta
ggtggtaacgcgccctgtattgtatttgatgatgctgatcttaaattagcagctcaaggc
attattgcttcaaaatatagagctaatggtcaaacttgtatctgtattaatcgtgtgttt
gtgcatgctaaaatatatgataagttactggccttattagttgagcatgtaaagagctta
aaagtagggaatggctttgagaaaggtgtaaaattgggtccgcttatttcagcccaggct
gtatcaaaagtagaaaggcttttaggcgatgctataaataaaggtggtaaggtggtatta
ggtggtaatcgtattcgggggcatggctacttttttgagcctactatagttgtgaatgct
agtgatgagatggaatgttttgttgaagaaatttttggccctatcacagtgttatatagt
tttaattctgaagaagaagtagtgaaaagagctaataatactatttatggtttagcagct
tatgtttatactaatgatatttctcgtatgtatcgtattactgaaaatttagaatatggc
atggtgggtattaataatacttccatttctaacgaagtggctccttttggaggaattaag
caatcaggatttggccgtgaaggatcatatatgggaatcaaagaatttcaaaacataaaa
tatatttgtgtaggcaatatctag
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