KEGG   Rickettsiales bacterium Ac37b: NOVO_01950
Entry
NOVO_01950        CDS       T03234                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rbt  Rickettsiales bacterium Ac37b
Pathway
rbt00300  Lysine biosynthesis
rbt00470  D-Amino acid metabolism
rbt01100  Metabolic pathways
rbt01110  Biosynthesis of secondary metabolites
rbt01120  Microbial metabolism in diverse environments
rbt01230  Biosynthesis of amino acids
Module
rbt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rbt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NOVO_01950 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NOVO_01950 (dapF)
Enzymes [BR:rbt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NOVO_01950 (dapF)
SSDB
Motif
Pfam: DAP_epimerase DUF6140 RS_preATP-grasp-like
Other DBs
NCBI-ProteinID: AIL64785
UniProt: A0A077FJU8
LinkDB
Position
complement(390657..391496)
AA seq 279 aa
MSIINFIKMHGCGNDFVVIDTKSLQDAVLPIDVIKKITDRRYGVGCDQLILIEKSEDADC
FMRIYNADGTEAGACGNASRCVASLLANTIHKNKITIETATNILMANIHANGLVTIDMGV
PKFSVSDLKLLWDINPLSLQIKIDDMSIDAAAINVGNIHLICFYDNDINLESLVTQVNAL
QIFAEEVNISVINIDHDIVYGKFSIKIRTWERGAGETLSCGTAACAATVSAIKRGYILHN
TSVEVHSKGGTLSIEWFRDNGSIMMTGEAIISFTGQINL
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtccattataaattttattaaaatgcatggttgtggtaatgattttgtggtgattgat
acaaagtcattacaagacgcggtactaccaatagatgtaataaagaagattactgatcgt
cgttatggggtaggttgtgaccaattaatattgatcgaaaaatctgaagatgcagattgt
tttatgagaatttataatgccgatggtactgaagcaggggcatgtgggaacgctagtcgg
tgtgtggctagtttattggctaataccattcacaagaacaagattactatagaaactgct
acaaatatattgatggcaaacatacacgctaacggattagtaactatagatatgggagta
ccgaagttttcggtttcagatcttaaattattatgggatataaatccattatcgttgcag
attaaaatagatgatatgagtatagatgctgctgcaattaacgtaggtaatatacatttg
atatgcttttatgataatgatattaatttagaaagtttggttactcaagttaatgccctc
caaatttttgctgaagaagtgaatatcagtgttattaatattgatcatgatatagtatat
ggaaagttttctataaaaatacgtacatgggaacgtggagcaggggaaactttatcttgc
gggactgctgcttgtgctgctactgtttcagctattaaaagaggatatatattacataat
acaagcgtagaggtacattctaaagggggaacactatctatagagtggtttagggataat
ggaagtataatgatgacaggtgaagcaattattagtttcactggccaaattaatttataa

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