Rickettsiales bacterium Ac37b: NOVO_02200
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Entry
NOVO_02200 CDS
T03234
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rbt
Rickettsiales bacterium Ac37b
Pathway
rbt03030
DNA replication
rbt03430
Mismatch repair
rbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOVO_02200 (dnaE1)
03430 Mismatch repair
NOVO_02200 (dnaE1)
03440 Homologous recombination
NOVO_02200 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbt03032
]
NOVO_02200 (dnaE1)
03400 DNA repair and recombination proteins [BR:
rbt03400
]
NOVO_02200 (dnaE1)
Enzymes [BR:
rbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOVO_02200 (dnaE1)
DNA replication proteins [BR:
rbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NOVO_02200 (dnaE1)
DNA repair and recombination proteins [BR:
rbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NOVO_02200 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIL64835
UniProt:
A0A077FJY2
LinkDB
All DBs
Position
437115..440549
Genome browser
AA seq
1144 aa
AA seq
DB search
MKFNFVHLRVRSSYSLSEGSIKIEDLVKLCITHKMPALAITDNGNLFCSLEFSKSCSDKG
IQPIIGCLLMVEYAENEIAQLVVIAKDEQGYKNLLKLVSSSFLEHNTPSPHIKFSDLAQF
NIGLIILTGGYYGIIDKLLLDNNANKAEEYLLNLKKIFGDRVYIELMRHNTPSKVEHQLI
DLAYKHDIALVATNDAYFAHRDMHEAQEVLLCIADGKYISTEDRRKLSTEQYFKSAEEMC
KLFADIPEAIENTIVIAQRCSVKSEEHPPALPSFVLEENRNVEDALKYLAKIGLEQKLHD
YVLTENMSSIQREETVKLYNDRLEYELSVITNMKFSGYFLIVSDFIKWSKNNSIPVGPGR
GSGAGSLVAWSLDITDLNPIRFGLLFERFLNQDRISMPDFDIDFCQEKRDEVINYVREKY
GYNKVAQIITFGKLQARAALRDVGRVLQMPYSQVDKIAKMVPFNAINPVTLSQAIEMEPS
LKNAKEEDPEVAKLLSIALQLEGLNRHASTHAAGIVISSDPLDEIVPLYKDPNSDMLVIQ
YSMKYAESVGLVKFDFLGLKTLTVISHTCKLIQSRGINIVINNIVLDDINTYNLLSQGNS
VGIFQFEGAGMRDALRKLKPDSIEDLIALGALYRPGPMENIPTYIACKHGIEKPNYLHPK
LEDVLKETFGVIIYQEQVMQIAQILAGYTLHAADLLRRAMGKKIKAEMDAQRELFIKGAI
NNGVDKEQASTIFDLVAKFAGYGFNKSHAAAYAIISYQTAYLKANFPVEFIVASMNLEID
DTDKINIFREEAILMNIKILPPDINKSEGYFCIELHENKPAIRYGLGAIKGVGVHAIELV
VTERKSHGEFKNIFDLATRIDPKSFNKRQFEGLIKSGSLDKLNSNRRQLLESLELITKYS
SSIQREKNSIQASLFGGMKEISKITEPELLSVDNWDENEQLQQECEAIGFYLSAHPLDKW
KLYLHNHNIKNSSYLREDLSEGFSSIKLAGIINTVKTRVSPRGRFVSAQVSDPYGIYEIS
IFNNDIITNDRELLTSKLPLLINAECRKDEGGVRLTVQNIQKLDEFLHRQYSMLQIWIDG
QEAVTAVKSLCSTPNTDGMKVKIFVIDHSKQEEIALDLPGQYQISPTNSLLLENSPGIIK
VQLK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaattttgtacatttacgcgtacgtagttcctactctttatcagaaggatct
ataaaaatagaagatctagtaaaattgtgtattacacataaaatgcctgctcttgctatc
actgataatggtaatttattttgctctttggaattttcaaaatcatgctcagataaagga
attcaaccaataataggttgccttttaatggttgaatatgcagaaaacgagattgctcag
cttgttgtgattgctaaagatgaacaaggctataaaaatttactgaaacttgtaagcagt
tcttttttagaacataatacaccttctcctcacattaaattctcagatttagcacaattt
aatataggtttaattattttaactggcggatattatggtattatagacaagcttttatta
gataataacgctaacaaggctgaagaatatcttctaaatctcaaaaaaatttttggtgat
agagtatatatagaattaatgcgccataatactccttctaaagttgaacatcaattaatt
gatcttgcttataaacatgatatagctctagtagctacaaatgatgcatattttgcacac
agagatatgcatgaagcccaagaagttttattatgcattgcagatggtaaatatatttcc
acagaagatcgtcgtaaattatctactgaacagtattttaaatctgcagaagaaatgtgt
aaattatttgcagatattcctgaggcaatagaaaatactatagtaattgctcaaagatgt
tctgtaaaatcagaagagcatcctcctgcattaccctcttttgttttagaagaaaatcgt
aatgtagaagatgccttaaagtacttagccaaaataggacttgaacaaaaattacatgat
tatgtcctcactgaaaacatgtctagcattcagcgagaagagaccgtcaaattgtataat
gataggcttgaatatgagctaagcgttattactaatatgaaattttctggctatttcctt
atagtctctgattttattaaatggagtaaaaataattcaataccagttggccccggcaga
ggatctggcgcaggttcgttagtagcttggagcttagatattactgatttaaatcctatt
cgttttggcttattatttgaaagatttctaaaccaagatcgtatttctatgccagatttt
gatattgatttttgccaagaaaaacgtgatgaagtaatcaattatgtacgagaaaaatat
ggatataataaagtagctcaaattattacctttggtaaattgcaagcaagagcagctctc
agagatgtaggacgtgtgttacaaatgccttattctcaagttgataaaatagctaaaatg
gtcccctttaacgctattaatcctgtcactcttagccaagcaattgaaatggaaccttct
cttaaaaatgcaaaagaagaagatccagaagttgctaaactactttctatagctcttcaa
ttagaagggctaaacagacatgcctctactcacgcagctggtatagttatttcaagtgac
cctttagatgaaatagtacctttatataaagatccaaattctgatatgctagttatacaa
tattctatgaaatatgctgagtcagttggattagttaaatttgactttttaggactaaaa
actttaactgtaatctctcatacctgtaaattaattcaatcaagaggaatcaatattgtc
attaacaatatagtcttagatgacatcaatacctataacttactttcacaaggtaattct
gtaggtatatttcaatttgaaggtgcaggtatgcgagatgctttgcgcaagttaaaacca
gattcaatagaagatttaattgctttaggagccttatatagaccgggaccaatggaaaat
atacctacctacatagcatgtaaacatggtatagaaaaacccaattatctccatccaaaa
ttagaagatgttttaaaagaaacttttggtgttattatatatcaagaacaagtgatgcaa
atagctcaaatactcgctggatatactctacacgctgcagatttgctaagacgtgctatg
ggtaaaaaaatcaaagctgaaatggatgcacagcgtgaattatttatcaaaggagctata
aataatggagtagataaggaacaagctagtactatttttgatttagtagcaaaatttgct
ggatacggctttaataaatcacacgcagcagcttatgctattatttcataccaaaccgct
tatttaaaagctaactttccagttgagtttattgttgcctcaatgaaccttgaaattgat
gatacagataaaattaatatctttagagaagaagctattttaatgaatataaaaattcta
cctccagatattaataaatctgaaggttatttttgtattgaactacatgaaaataagcca
gctatccgctatggtttaggagctataaaaggtgtaggagtacacgctattgagctagtt
gtaactgaacgtaaatctcatggagaatttaaaaacatttttgatcttgctacaagaatt
gaccctaaatctttcaataaaagacaatttgaaggactaattaagtctgggtcattagat
aagcttaatagtaatagaagacaattattagaatcattggaactaattactaaatatagc
agcagcatccaaagagaaaaaaatagtatacaggctagcctatttggaggtatgaaagag
ataagtaaaattactgaacctgagctattatctgttgataattgggatgaaaatgaacaa
ttacaacaagaatgcgaagctataggattttatttgtctgcacatccactagataaatgg
aagctatatttacataatcataatattaaaaactcttcgtatttacgtgaagatttatcc
gaaggtttttcatcaattaagctagctggaattattaatactgttaaaacacgtgtatca
cctagaggcagatttgtgtcagcacaagtttcagatccttatggtatttatgaaatttcc
atatttaacaatgacataattactaatgatagagagttattaactagtaaattaccatta
cttattaatgctgaatgccgcaaagatgaaggaggagtaagattaacagtacaaaatata
caaaagctagatgagtttttacatagacaatattcaatgctacaaatttggattgatggt
caagaagcagtaactgctgttaaatctttatgctctaccccaaataccgatggtatgaaa
gtaaaaatttttgttatagaccatagtaagcaagaagaaatagctcttgatttaccaggt
caatatcaaatttctcctactaattctttattgttagaaaactcccctggaataattaaa
gtacaactcaaataa
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