Rickettsiales bacterium Ac37b: NOVO_04150
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Entry
NOVO_04150 CDS
T03234
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rbt
Rickettsiales bacterium Ac37b
Pathway
rbt03410
Base excision repair
rbt03430
Mismatch repair
rbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOVO_04150 (recJ)
03430 Mismatch repair
NOVO_04150 (recJ)
03440 Homologous recombination
NOVO_04150 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbt03400
]
NOVO_04150 (recJ)
DNA repair and recombination proteins [BR:
rbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NOVO_04150 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NOVO_04150 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NOVO_04150 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIL65213
LinkDB
All DBs
Position
833406..835178
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AA seq
590 aa
AA seq
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MQEKIKNHLYYSIRGHYWCLKDVDERNCSYIQQKYNIPAMIAELLINRGVKLDQVNDYLN
PTLRAFLPNPMILLDMEKAANRIVEAIEYNHKIVIFGDYDVDGATSSALLKRFFSAISFH
NHTIYIPDRFTEGYGPNLQAFEQMLDEKVKLVITVDCGTAAIDTINKITDKGLEIIVVDH
HLGGEILPRAVAIVNPNRYDETSKYGYLAAVGVTFLLVVAITSILRQKGWFKVVSEPDLL
SFLDIVALGTVCDVVPLIELNRAFVKQGLKVMSKRNNIGLTSLIDLAGINEELNIYHLGY
VIGPRINAGGRIGKSWLGAKLLANDDFNEANDIAKTLNHLNQERRAIETMTLEEAFVLAE
QSLSELPFVYITGNKWHQGVIGIVASRLKDKYDKVVIVISVENNIGKASCRSIVGIDIGA
LIINAKNLGLVIEGGGHAMAAGFTIMLDKVILLKQFLNEQLQDIPALLEYDCRTRYFEGF
LSLEAITLELAKLLDKLEPYGASNPAPKFLVKNSKLIKINVIAGKHISCLFKTQSSTGVI
KGIIFNAVNTLIGNFLLSSLGRDLDIIGQLQISKWQGNERVELIISDVIK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaaataaaaaatcatttatattattcaattagaggacattattggtgcctt
aaagacgtggatgaacgcaattgctcatatatacagcaaaaatacaatattccagcaatg
attgcagaattacttattaatcgaggggtgaaactggaccaggtaaatgattatttaaat
cccactttacgtgcttttttacccaatcctatgatattgcttgatatggaaaaggccgca
aatagaatagttgaagctatagaatataatcataagatagtaatttttggagattacgat
gttgatggtgctacatctagtgcattattaaaacgctttttttctgcaatttcttttcat
aatcatacaatttatatacctgatagatttacagaaggttatggtcctaatttacaagct
tttgaacaaatgcttgatgaaaaagtgaaattagtgattacagttgattgcggaacagcg
gcaattgatacaattaataaaataacggataaaggtctagagattattgtggttgatcat
catttaggaggggaaatattgcctcgtgctgtagctattgttaatccaaatcgttatgat
gaaacttctaaatatggctatttagctgcagtaggagtaactttcctattagttgtagca
atcacttctatacttagacaaaaagggtggtttaaggtggtttcagaacctgatttatta
tcattcctagatatagtagctttaggtacagtatgtgatgtagtacctttaatagagctt
aatagagcctttgttaaacaagggctcaaagtaatgtccaagagaaataatataggatta
acttctttaattgatctagctggtataaacgaagaattgaacatttatcatcttggatat
gtaataggtccacgtatcaatgcaggaggtagaataggtaaatcatggctgggtgctaaa
ttattagctaatgatgattttaatgaagccaatgatattgcgaagacattaaatcattta
aatcaagaaagacgtgctatagaaaccatgacattagaggaagcctttgtgcttgcggag
caaagtttatcagaattaccatttgtatatattacaggtaacaagtggcatcagggagta
ataggtatagtagcaagtagattaaaggataaatatgataaagtagttatagttatttct
gttgaaaacaatataggtaaagcttcatgtcgttcgattgttggcatagatataggagca
ttaataattaatgccaaaaatttgggattagttatagagggtggaggtcatgctatggcc
gctggattcactattatgctagacaaagtgattttattaaagcaatttttaaatgagcaa
ttgcaagatattccagctcttttagaatatgattgtcgaacacgatattttgaaggattt
ctatcactagaagccatcactctagagttagctaaattattagataaacttgaaccttat
ggtgcaagtaatcctgctccaaaatttcttgtcaaaaatagtaagctaataaaaataaat
gtaatagctggcaaacatattagctgtttatttaaaacgcaaagtagtacaggtgttatt
aaaggaattatttttaatgcagttaatactttaataggtaattttttgctttcatctttg
ggtagagacctagatattattggtcaattacagatcagtaaatggcaaggtaatgaaagg
gtagaattaataataagtgatgtaataaaataa
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