Rickettsiales bacterium Ac37b: NOVO_05860
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Entry
NOVO_05860 CDS
T03234
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rbt
Rickettsiales bacterium Ac37b
Pathway
rbt00300
Lysine biosynthesis
rbt00470
D-Amino acid metabolism
rbt01100
Metabolic pathways
rbt01110
Biosynthesis of secondary metabolites
rbt01120
Microbial metabolism in diverse environments
rbt01230
Biosynthesis of amino acids
Module
rbt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NOVO_05860 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NOVO_05860 (lysA)
Enzymes [BR:
rbt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NOVO_05860 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIL65532
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All DBs
Position
complement(1167819..1168817)
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AA seq
332 aa
AA seq
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MESFYYLNNSLHVESIALENIIKTLEPPFYCYSYNSILNNYLLLENCFTAIKPLICFAVK
ANSNLAVLSIIASLGGGADAVSKGEIIRALKSGIAPNKIVFSGVGKTYEELKFALEKNIL
QFNIESKAELLLLNQIAGELGKQANVALRVNPDVDGMTHHKISTGKKDNKFGIYWTEIEK
IAKEIQSLHYIKLVGISTHIGSQIAEIEPFQRTFILMTQLVHTLNKQGHNIKRIDLGGGI
GIPYLQADILFPLKEYAILAEKCALETGCELVLEPGRFIVGNSGIVVTRVTYVKETKWRN
FLVVDAGMNDLMRPRCTISRVDGRKKEYISKS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttttattatttaaataatagtttgcatgttgaatctatagctcttgaaaat
attatcaaaactttagaaccccctttttattgctattcatataatagtatattaaataat
tatttattacttgaaaattgttttaccgctattaagccattaatttgttttgccgttaaa
gcaaattctaatttggcagtattatcaattatagcttcgcttggaggtggagctgatgct
gtctcaaagggagaaattattagagcccttaaaagtggtattgccccaaataaaatagta
ttttctggtgtaggcaaaacatatgaggagcttaaatttgctctagaaaaaaatatattg
cagtttaatatagaatctaaagcagaactattattattaaatcagatagctggagaatta
ggaaaacaggctaatgtagctttaagagtaaatcctgatgttgatgggatgactcatcac
aaaatttctacaggtaaaaaagataataaatttggtatttattggactgaaatagaaaaa
atagctaaggaaattcaaagtcttcactatataaaattagtgggtatttctacccatata
ggttcccagattgcagaaatagaaccgtttcagcgtacttttatattaatgacacaatta
gtgcatactcttaataagcaaggacataatataaaaaggatagatctaggagggggtata
ggaataccatatttgcaagctgatatactatttccattaaaagaatatgctattttagca
gaaaaatgtgcattagagacaggctgtgaattagttttagagcctggtagattcattgtg
ggtaatagtggtatagttgttactagagtaacttatgttaaagaaactaagtggcgtaat
tttctggtagtagatgctggtatgaatgatttaatgcgacctaggtgtacaatttcaagg
gttgatggaagaaaaaaagagtatataagtaagagctag
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