Rugosibacter aromaticivorans: PG1C_00020
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Entry
PG1C_00020 CDS
T03689
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03030
DNA replication
rbu03430
Mismatch repair
rbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG1C_00020
03430 Mismatch repair
PG1C_00020
03440 Homologous recombination
PG1C_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbu03032
]
PG1C_00020
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_00020
Enzymes [BR:
rbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG1C_00020
DNA replication proteins [BR:
rbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG1C_00020
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG1C_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AJP47254
UniProt:
A0A0C5J6J9
LinkDB
All DBs
Position
5338..6441
Genome browser
AA seq
367 aa
AA seq
DB search
MLLYKGLRDQLLSPLQSVCGIVEKRHTLPILSNVLIEKNGESLTLLATDIEIQITTQSKA
TGEEKVAITVGARKLQDILRSLPETTEVSLTLIDKRLQLKAGKGKFNLQTLPAEDFPRMV
VTDDQPTRFSVTQKKLKQLLALVQYAMAQQDIRYYLNGLLLITKGNELRVVTTDGHRLAY
ATGQLTEAPSPIEVILPRKTVLELSRQLSDSDELVEIVLTPSQARFKFNNIEFISKLIDG
KFPDYERVIPQHHGKVIKLSRNQLIQSLQRVAILTNEKFRGVRLLLDAGSLKIISNNAEQ
EEAQEEIEIDYTSEPLDVGFNVTYLLDVLTNVSQETIELHLADANSSALFILPDNENFKY
VVMPMRI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctcttatataaaggcttacgagaccaattgctctcaccactacaatctgtctgtgga
atcgtggaaaagcgacatacgctacccattctttccaacgtgcttatagaaaaaaatggg
gaaagcttgaccttattggcaacagatattgaaatacaaatcaccacccagagtaaggcc
acaggtgaggagaaagtagcaattactgttggtgctcgaaaactacaggatattctgcga
tcattaccagaaactacagaagtaagcttgacactcattgataagcgtcttcaacttaaa
gccggtaaaggtaagtttaatttacaaacattacccgccgaagactttccccgtatggta
gtgaccgacgatcaaccaacacgattttcagtgactcaaaaaaagctaaagcaattactg
gctttagttcaatacgcaatggcgcaacaagatattcgttattatttaaacggacttttg
ttgattacaaaagggaatgaattgcgcgttgtaacgaccgatggacatcggctcgcgtat
gcaactggccaacttacggaagccccatcaccgatagaagtcattcttccgcgtaaaaca
gtattagagttatcccgacaactatcagactcagatgaattggtagaaattgttttaact
ccaagtcaagcacgctttaaattcaacaatatcgaatttatatcaaaattaattgacgga
aaattcccggattacgaacgagtcattccgcagcatcatgggaaagtaattaaactttca
cgtaatcagcttatacaatcattgcaaagggttgcgattttaacgaacgaaaaatttcgc
ggtgtgcggctattacttgatgcgggaagtttaaaaattatttccaataatgcagagcaa
gaagaagcccaggaagaaattgaaattgattacaccagcgaaccgctagatgtaggtttt
aatgtcacttatcttctcgatgttttaaccaatgtttctcaagaaacaatcgagttgcat
ttagcagacgcaaactcaagtgcattattcatattgccagataatgaaaatttcaaatat
gttgttatgcccatgcgcatttaa
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