Rugosibacter aromaticivorans: PG1C_00125
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Entry
PG1C_00125 CDS
T03689
Name
(GenBank) cytochrome C550
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu00550
Peptidoglycan biosynthesis
rbu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PG1C_00125
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbu01002
]
PG1C_00125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbu01011
]
PG1C_00125
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PG1C_00125
Peptidases and inhibitors [BR:
rbu01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PG1C_00125
Peptidoglycan biosynthesis and degradation proteins [BR:
rbu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PG1C_00125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AJP47270
UniProt:
A0A0C5J5J4
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All DBs
Position
31573..32736
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AA seq
387 aa
AA seq
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MRHLVILFACLPWIASLAQTPAVAVPAVPVPVPVPALSARAWVLMDYASGQVLAAHDAEQ
RLEPASLTKMMTTYLVAEALADRRLSLQQPVTVSERAWRTQGSRSFIPVNGQVLVDDLLK
GMVIQSGNDAAVALAEAVGGSEPAFATMMNRTAQRLGLKDTNFLNASGFFDGPQPTHYST
AHDMARLAAALVRDHPEMHRLHAVKEYTYAGIRRYNRNRLLWADPTVDGLKTGHSNAAGY
CLVATSLRPPRRLISVVLGAPSDEARARDSLNLLNWGYTAFEAVKVYGKDQTVSQFKVFK
GAQNTVKVGVTEDLIVSVPRGMAGKLTARLDSRQPLLGPVHLGTPVGTLKLMLGEQTWGE
YPVVALEEVPLAGFFGRLWDTLVLWFR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccttgttattttgtttgcttgtctgccgtggattgctagcctggcacaaacg
ccagctgttgctgtgcctgcggttcctgttcccgttcccgtacccgccttgagcgcacgc
gcgtgggtattgatggattacgccagcgggcaagtgctcgcggcgcatgatgcggaacag
cggcttgaaccagcttcgttgaccaagatgatgacgacgtatctggtcgccgaagcgctg
gcggataggcgactttcgttgcaacagccggtcaccgtttctgagcgggcctggcgtacg
caaggttcgcgcagttttatccctgttaatgggcaggtgctggtggatgatctgctcaag
ggtatggtgattcagtcgggcaacgatgccgctgtcgccttggctgaggcggttggtggt
agcgagccggcctttgccaccatgatgaatcgcacagcgcagcggttgggtttgaaagat
accaactttcttaatgccagcggtttttttgatggcccgcagcctacgcattactccacc
gcacatgatatggcgcggctagccgcggcgctggtgagagatcatcccgagatgcatcgc
ctgcatgccgtgaaagaatatacctatgctggcatccgccggtacaaccgtaaccgtctg
ctgtgggccgatccgacagtcgatggcctgaaaacaggtcattcgaatgcggcgggttat
tgtttggttgccacctcgttgcgcccgccgcgacggctgatttcagtcgtgctaggcgcg
ccttcggacgaggcgcgtgcgcgtgattcgctcaatttgctgaactggggctacactgct
tttgaggcggtaaaggtgtatggcaaagaccaaactgtctcgcagtttaaagtgttcaag
ggtgcccaaaatacggtcaaagtgggtgtcactgaagacctgattgtttctgtaccacgc
gggatggcgggcaagctcaccgcacggctggacagtcggcagcctttgcttggcccagta
cacctcggtactccggtgggcacgctgaaactcatgctgggtgagcaaacctggggtgag
tatcccgtagtcgcgctggaagaagttccgctggcaggtttctttggtcggctgtgggac
accttggtactctggttccggtga
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