Rugosibacter aromaticivorans: PG1C_00260
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Entry
PG1C_00260 CDS
T03689
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu00300
Lysine biosynthesis
rbu00470
D-Amino acid metabolism
rbu01100
Metabolic pathways
rbu01110
Biosynthesis of secondary metabolites
rbu01120
Microbial metabolism in diverse environments
rbu01230
Biosynthesis of amino acids
Module
rbu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG1C_00260
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PG1C_00260
Enzymes [BR:
rbu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PG1C_00260
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AJP47290
UniProt:
A0A0C5J5L3
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Position
complement(54161..55015)
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AA seq
284 aa
AA seq
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MKIRFTKMQGAGNDFVVLDAIRQTFALTTPQIRFIADRHFGIGCDQILVVEKATRPDVDF
RYRIFNADGGEVEQCGNGARCFVRFVHEQGLTHKRQIRVETTSGIISPQLEATGEVTVDM
GQPRFLPAEIPFISENDALVQTLVVGDTSVEISVVSMGNPHAVQVVADVDTAPVARLGPL
IESHVRFPRRVNAGFMQVLDAHTVRLRVYERGAGETLACGTGACAAVVAGIRRQLLTSPV
RVITRGGELTIAWNGSDSALDSVLLTGPATTVFTGEIDLPEDFK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgctttaccaaaatgcagggcgcgggcaatgactttgtcgtgctggatgcc
atccggcagacatttgcgctgactacgccgcagatacgatttatcgccgatcgccatttc
ggtattggttgcgatcaaattctggtggttgaaaaagccacccggcccgatgtcgatttt
cgttatcgcattttcaatgcggatggtggcgaggtggagcaatgcggcaacggcgcgcga
tgctttgtgcgatttgtgcacgaacagggattaacccacaagcggcagattcgcgttgaa
accacctcgggaattatttctccgcaactcgaagccacgggggaagtcaccgtcgatatg
ggtcagccgcgttttttgccagcggaaattccatttatcagcgagaacgatgcccttgtg
caaacgcttgttgtcggcgacacatcggtcgagatcagtgtcgtctcgatgggcaacccc
catgcggtgcaggtagtggctgacgttgataccgcgccggtggcccgattggggccattg
attgaatcccacgtgcgttttccacgccgcgtgaatgccggcttcatgcaagtgctggat
gcgcacacggtgcgcttgcgcgtgtatgagcggggcgcaggcgaaaccctggcctgcggt
acaggcgcttgcgctgcggtcgtggcgggcatacgtcgccaattgctgacttcccccgtg
cgcgtcatcacgcgcgggggcgagttaacgatcgcctggaatggcagcgattctgctcta
gactcggttctgctaaccggcccggcgaccactgtttttactggtgaaattgatctacct
gaggactttaaatga
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