Rugosibacter aromaticivorans: PG1C_00905
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Entry
PG1C_00905 CDS
T03689
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG1C_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbu03019
]
PG1C_00905
Messenger RNA biogenesis [BR:
rbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PG1C_00905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AJP49314
UniProt:
A0A0C5JC14
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All DBs
Position
170489..171070
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AA seq
193 aa
AA seq
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MLDREGYRPNVGIILTNQRNEVFWGKRIREHFWQFPQGGIDKGETPEQAMFRELYEEVGL
MPEHVRIIGRTRSWLRYEVPQHWVRREGQSHYRGQKQIWFLLRLIGRDSDVHLRASARPE
FDAWRWSSYWIPLDSVIEFKRGVYEAALNELSHILFRGHVDQHAAQPLSQPSQTPEQKST
GASASQSLTDHAP
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgtgaaggatatcgcccaaacgtcggcatcattctgaccaatcagcgtaat
gaggttttttggggcaagcgtatccgtgagcacttctggcagtttccgcagggtggcatc
gataaaggcgaaacccccgagcaggcgatgtttcgggaattatacgaggaggtgggcctc
atgccggaacatgtgcggattatcggccgcactcgcagctggttgcgttatgaggtgcca
cagcactgggttcgccgcgaaggacagagtcactatcgcggccagaagcagatctggttt
ttgttgcgcttgatcggcagggatagcgatgtacacctgcgcgccagtgcgcggccggag
tttgatgcctggcgttggagttcgtactggattccgctggatagcgtgattgaattcaag
cgtggcgtgtatgaggctgccttgaatgaactttctcatattttgtttcgtgggcacgtc
gatcaacacgccgcccagccattaagtcagcccagccaaacacctgagcagaaaagcacg
ggtgcgtccgctagtcaatccttaacggatcatgcaccgtaa
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