Rugosibacter aromaticivorans: PG1C_02695
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Entry
PG1C_02695 CDS
T03689
Name
(GenBank) SPO1 DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PG1C_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_02695
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PG1C_02695
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PG1C_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJP47663
UniProt:
A0A0C5J7J2
LinkDB
All DBs
Position
530854..531477
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AA seq
207 aa
AA seq
DB search
MNELLCCTECPRLATFLADVRGNYPDYHARPVLPFGDPKARLLIVGLAPGMHGANRSGRP
FTGDYAGILLFETLHAFGFASQPVSVAADDGLTLNDCRITNAVKCLPPQNKPETNEIKNC
NRWLAEELAAAPEVRVILALGLVAHKAVLMAAGLKQSAFTFAHAARHVLPDGRVFVDSYH
CSRYNTQTRRLTSADFSHVFRLIRNEL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacttctatgctgtaccgaatgcccgcgcctggcaacttttcttgcggatgtg
cgcggcaactatccggattatcacgcgcggccggtattgccctttggcgacccgaaggcg
cgcctgctgatcgtaggcctggcgcctggcatgcatggcgccaatcgtagcggccggcca
ttcacgggcgactatgcgggcattctgctctttgagaccctgcatgcgtttggttttgct
tcgcagccggtgtccgtcgcggcggacgatggattgacgctaaacgattgccgcatcacc
aatgccgtgaaatgtttgccgccgcaaaacaaaccggaaacgaatgagataaaaaactgc
aatcgctggctggcagaagagcttgctgccgcgcccgaagtgcgcgtgattctggcgttg
gggctggtagcgcacaaggccgtgctgatggcggccgggctcaagcagtcggcgttcacc
tttgcgcacgccgcgcgtcacgtgctgccggatggccgtgtgttcgtcgacagttatcat
tgcagccgttacaacacgcaaacccgccgtctcaccagcgccgacttctcgcatgtcttc
cgcctcatccgcaacgagctttga
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