Rugosibacter aromaticivorans: PG1C_04080
Help
Entry
PG1C_04080 CDS
T03689
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG1C_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_04080
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG1C_04080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG1C_04080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
AAA_22
Kinesin
AAA_16
FlaG
UB2H
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJP47868
UniProt:
A0A0C5J802
LinkDB
All DBs
Position
804524..806596
Genome browser
AA seq
690 aa
AA seq
DB search
MTYANDPKADVVTFEGSPFRLHQPFSPAGDQPEAIRLLAEGINDGLSFQTLLGVTGSGKT
YTMANVIARLGRPALVLAPNKTLAAQLYSEFREFFPENAVEYFVSYYDYYQPEAYVPSRD
LFIEKDSAINEHIEQMRLSTTKSLLERRDVVIVCTVSAIYGIGDPVDYHSMILHLRQGEK
MAQREIIRRLTEMQYERNEVDFRRGVYRVRGDVIDVFPAENAENAIRITLFDDEIETLAL
FDPLTGQTKKKLGRFTVFPSSHYVTPRATVLKAVEAIKHELRERMDFYTQAQKLVELQRI
EQRTRFDLEMLDQLGFCKGIENYSRHLSGRQPGEPPPTLYDYLPSDAIMFVDESHIAIPQ
VGSMYKGDRARKENLVSYGFRLPSAMDNRPLKFEEFEKLMPQTVFVSATPSVYEEAHQGQ
VVEQLVRPTGLVDPILEIRPAATQVDDLLAEAKKRIALGERVLVTTLTKRLSEQLTEYLS
DNGIKVRYLHSDIDTVERVEIIRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEG
FLRSTRSLIQTIGRAARHINGTAILYADRITDSMQRAITETERRRNTQLAHNAAYGVIPQ
GVNKRIKNIIDGVYDADTAAQTRQAVQEAARYEMMSEKELAQHIKKLEKSMQAHAKNLEF
EAAAAARDELFRIKRLAFGGEAHDAEGDAG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtacgcaaatgatccaaaagcagacgtggtgacgtttgagggcagcccttttcgt
ctccatcaaccattttcaccagcgggcgatcagcccgaagcgattcgcttgctggctgaa
gggattaacgacggattgtcgtttcaaacattgcttggggtgacgggctctggcaagacc
tacaccatggcaaacgtgattgcacggctagggcggccggctttggtgctggcacccaac
aaaacattggcagcgcagttgtattccgaattccgcgagttttttccggaaaacgcggtg
gagtatttcgtttcttattatgactactatcagcccgaagcctatgtgccttcgcgcgat
ttgttcatcgagaaagactcggcaatcaatgagcatattgagcaaatgcgcttgtcgacg
accaagagtttgcttgagcggcgcgacgtggtcattgtgtgcacggtgtcggcgatttac
ggcattggcgacccggtggattaccacagcatgattctgcatttgcgccaaggcgagaaa
atggcgcagcgcgagatcattcgtcggctgactgaaatgcagtacgagcgcaatgaggtt
gattttcggcgtggtgtttatcgtgtgcgcggtgatgtgattgatgtgttcccggctgaa
aatgcggagaacgcgatacgcattactttatttgatgatgaaattgagaccttggccctg
tttgatcctttaacaggacaaacgaagaaaaagttaggtcgatttaccgtgtttccttcg
agccattacgtcactccccgtgccacggtgctcaaggcagtagaggcgatcaagcacgaa
ttgcgtgagcggatggatttttatacccaggcgcaaaagctggttgagttgcagcggatt
gagcagcgcacgcggtttgatctggagatgctggatcaactcggcttttgcaagggcatc
gaaaactactcgcgccatttatccggccgccagccgggcgagccacccccgacgttgtat
gactatttgccgagcgacgcgatcatgtttgtggatgagtctcatatagccatcccacaa
gtgggcagcatgtataaaggcgaccgcgcgcggaaagaaaacctcgtgagctatgggttt
cgtctgccctcagcgatggataatcgtcctttgaagttcgaggagttcgagaaactaatg
ccgcaaacggtgtttgtttctgcgacgccatcggtctatgaagaggcgcatcaaggccag
gtggttgagcagttagtgcgccccacggggctggtcgatccgattctggaaattcgtccg
gccgcaacgcaagtggatgatttgttagcggaggcaaaaaaacgcattgcccttggtgag
cgagtgctggtaaccaccttgaccaagcggctgtctgagcaactgactgagtatttgagt
gacaatggcatcaaggtgcgttacctgcactcggatattgataccgtcgagcgtgtcgag
attattcgcgatctgcgtctgggggtattcgatgtgttgatcggcatcaatttgttgcgc
gaggggctggatattccggaagtctccctggtggcgatactcgatgctgacaaagagggg
tttttacgctcaacccgttcgttaatccaaaccataggccgcgcggcacggcatatcaat
ggcacagcgattttgtatgcggatcgaatcacggattcgatgcaacgtgcgattactgaa
accgaacgccgtcgaaacacgcagttagcacataacgcggcttatggggtcatcccgcag
ggagtgaataagcgtatcaagaacatcattgatggggtttatgatgcagatacggccgct
caaacgcgccaagctgtccaagaagcggcgcgctatgaaatgatgagcgaaaaagaatta
gcacagcacattaaaaagctggaaaaatcaatgcaggcacatgccaagaatctggagttt
gaagccgccgccgccgcccgtgatgaactttttcgcatcaagcgcttggcgtttggcggt
gaagcgcatgatgctgaaggtgatgcgggctga
DBGET
integrated database retrieval system
