Rugosibacter aromaticivorans: PG1C_04660
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Entry
PG1C_04660 CDS
T03689
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rbu
Rugosibacter aromaticivorans
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbu03016
]
PG1C_04660
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PG1C_04660
Transfer RNA biogenesis [BR:
rbu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PG1C_04660
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJP47946
UniProt:
A0A0C5JKP3
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All DBs
Position
937720..938397
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AA seq
225 aa
AA seq
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MKTAVNKHRVFFALLPDEEIASHLAALGQHVAARSGSRLTPVHNLHLTLVFAGGVTSAQM
DTLVACAHTVSAAFGASLEVENEHEGELDLRVRLNRLGFWPQGGVLWAGCRLLPSNQHRP
VTDARLFADSPAMMSALSAGALPWMLAAQLKHALLAAGLPMTLSMAPQFFVPHVTLARGV
RCASLPRLGSPLGWSVREFVLLESIPQGMHPRYETRAVFPLYPDN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgccgtgaataaacatcgcgttttttttgcactattgcccgatgaggaaatt
gcctcgcatctcgcggctttggggcagcatgtggctgctcgtagtggcagccgtctcacg
cccgtgcacaacctgcatctgacgcttgtctttgcgggcggagtgacttcagcgcagatg
gatacgctagtggcttgcgctcacacggtgagtgctgcatttggcgcatcgcttgaggtg
gagaatgagcacgaaggcgaactcgacttgcgcgtgcgtctcaatcggcttggtttttgg
ccacaaggaggcgtgctctgggcggggtgtcgtttgttgccgtctaaccagcatcgtcca
gtgacagacgcaagactttttgcagattcgcctgcgatgatgtctgcactgagtgctggt
gcgcttccctggatgctggcggcccagctcaagcatgctttattggcggcgggcttgcct
atgacactgtccatggcaccgcaattttttgtgccgcatgtcacgcttgcgcggggtgtg
cggtgcgcatcgctgccgcgtctgggctcaccgctcggttggtctgtgcgtgagtttgtg
ctgctcgaatcgattccgcaggggatgcatccgcgctatgaaacgcgggcggtatttccg
ttgtatcccgataattaa
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