Rugosibacter aromaticivorans: PG1C_05380
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Entry
PG1C_05380 CDS
T03689
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PG1C_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbu03019
]
PG1C_05380
03009 Ribosome biogenesis [BR:
rbu03009
]
PG1C_05380
Messenger RNA biogenesis [BR:
rbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PG1C_05380
Ribosome biogenesis [BR:
rbu03009
]
Eukaryotic type
Pre-60S particles
RNases
PG1C_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJP48041
UniProt:
A0A0C5JKZ7
LinkDB
All DBs
Position
1087788..1088333
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AA seq
181 aa
AA seq
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MAQDQNALVWLDMEMTGLNPDSDRIIELAMVITNSNLEVIAEAPTWVVHQPDEVLNGMDE
WNRNTHSRSGLMDRVKASIMNDADVEQQALEFVRRHVPIRTSPMCGNSICQDRRFMARYM
PKLEEWFHYRNLDVSTLKELCRRWKPALAKGLKKHGRHEALADVLESIDELKYYRENFLR
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggatcaaaacgcacttgtctggctggatatggaaatgaccggacttaatccg
gacagtgatcggatcatcgagttagcgatggtcattaccaactcgaatctggaggtcatt
gccgaggcaccgacgtgggtcgtgcatcaacctgatgaggtgctcaatggcatggatgag
tggaaccgcaatacccatagccgatcagggctgatggatcgggtcaaggcatcgatcatg
aacgatgcggatgtcgaacaacaagccctggagtttgtccgtcgtcatgtaccgatacgc
acctcgcctatgtgcggtaattcaatttgtcaggatcgtcgctttatggcgcgctatatg
cccaagctggaagagtggtttcactatcgcaatcttgatgtatcaacgcttaaagagtta
tgcaggcgctggaagccggcgttggcaaagggcctgaaaaagcacggccgccacgaggcg
ttggcggatgtgcttgagtcgattgatgagctcaagtattaccgtgaaaattttttgaga
ctttag
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