Rugosibacter aromaticivorans: PG1C_07620
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Entry
PG1C_07620 CDS
T03689
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PG1C_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbu03019
]
PG1C_07620
03009 Ribosome biogenesis [BR:
rbu03009
]
PG1C_07620
03036 Chromosome and associated proteins [BR:
rbu03036
]
PG1C_07620
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PG1C_07620
Messenger RNA biogenesis [BR:
rbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PG1C_07620
Ribosome biogenesis [BR:
rbu03009
]
Eukaryotic type
90S particles
RNase
PG1C_07620
Prokaryotic type
rRNA processing factors
PG1C_07620
Chromosome and associated proteins [BR:
rbu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PG1C_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AJP48365
UniProt:
A0A0C5J8R7
LinkDB
All DBs
Position
complement(1557675..1558355)
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AA seq
226 aa
AA seq
DB search
MKLKAVEASLGHQFTRPELLRQALTHRSFGVPHNERLEFLGDSILNCVIAHALFMRYAEC
NEGELSRLRASLVRQETLAEIALSMRLGDYLRLGEGELKSGGFSRPSTLADALEAVFAAV
FLDAGFIAAQQVIDRLFTPWVLRIDPQKSGKDPKTALQELMQGRHLSLPSYSLLALRGEA
HAQEFEVSCVVAELNISCVGKGSSRRTAEQQAARLTLAQITQIKNE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaagcggtagaagcttccctgggacatcaatttactcgtccagagttgctc
cggcaagcgctgactcaccgaagctttggtgtgccgcacaatgagcgccttgagtttctt
ggcgattcgatactaaattgcgttattgcgcatgccttgtttatgcgctatgcagaatgc
aatgagggcgagctttctcgcttgcgtgcgagtctggtgcgccaagaaaccctcgccgaa
attgcactgagcatgcgcctaggtgattatttgcgtctaggcgaaggggagctaaaaagt
ggcggctttagtcgcccatcaaccctggccgatgccttggaagccgtgtttgcggcagtt
ttcctggatgcggggtttattgctgcgcaacaggttattgatcgcctttttactccatgg
gttttgcgtatcgacccgcaaaaatcagggaaagatcctaaaacagccttgcaagaatta
atgcaggggcgacatttatccttgccaagttattctctgctcgccctgcgtggcgaggcg
cacgcacaggaatttgaagtctcatgcgtggttgccgagttgaatatttcgtgtgtcggc
aaaggcagtagtcgtcgtacagccgaacagcaagccgctcgtttgacgcttgcccagatt
acccaaataaaaaatgaatga
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