Rugosibacter aromaticivorans: PG1C_09205
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Entry
PG1C_09205 CDS
T03689
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rbu
Rugosibacter aromaticivorans
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbu03032
]
PG1C_09205
03036 Chromosome and associated proteins [BR:
rbu03036
]
PG1C_09205
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_09205
DNA replication proteins [BR:
rbu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PG1C_09205
Chromosome and associated proteins [BR:
rbu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PG1C_09205
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PG1C_09205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
CATASP
Motif
Other DBs
NCBI-ProteinID:
AJP48572
UniProt:
A0A0C5J0J8
LinkDB
All DBs
Position
1869593..1869889
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AA seq
98 aa
AA seq
DB search
MTRSELVERLSRYYPSLTHADISASVSVILDAVTTALANGDRAEIRGFGSFRLNHRPSRI
GRNPKTGVTVNVPAKIVPHFKPGLELRERVNLSLEINK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatcagaactcgttgagcgcctttcacgctactacccttccctaacgcatgca
gacatctccgcttcggtatcggtcattcttgatgccgtcaccaccgcgcttgcaaacggc
gaccgggccgagattcgaggattcgggagttttcggctcaatcacaggccatcaaggatt
ggacggaatccgaaaacaggtgtgacagtcaatgtgccggcgaagatcgtgccgcatttc
aaaccggggctggaattgcgtgaacgcgtcaacttgagcctggaaataaacaaatga
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