Rugosibacter aromaticivorans: PG1C_09765
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Entry
PG1C_09765 CDS
T03689
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu00020
Citrate cycle (TCA cycle)
rbu00190
Oxidative phosphorylation
rbu00650
Butanoate metabolism
rbu00720
Other carbon fixation pathways
rbu01100
Metabolic pathways
rbu01110
Biosynthesis of secondary metabolites
rbu01120
Microbial metabolism in diverse environments
rbu01200
Carbon metabolism
Module
rbu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rbu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rbu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PG1C_09765 (sdhB)
00650 Butanoate metabolism
PG1C_09765 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PG1C_09765 (sdhB)
00720 Other carbon fixation pathways
PG1C_09765 (sdhB)
Enzymes [BR:
rbu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PG1C_09765 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
AJP48642
UniProt:
A0A0C5J0R6
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All DBs
Position
complement(1994900..1995595)
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AA seq
231 aa
AA seq
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MKLSIFRFNPEQDEKPYMQDYEIELETTDQMLLDVIVRLKVQDDTLTFRRSCREGVCGSD
AMNINGRNGLACITPVRSLKQPIKLRPLPSFPVIRDLVVDMTQFFKQYHSIKPYLINNEP
APERECLQSPEDREKLSGLYECILCACCTSQCSSSWWNPDKFVGPAGLLQAYRFIIDSRD
QATQERLDDLNDPYRLFRCRSIMNCTEVCPKGLVPSRAIEKIRLMMVKESF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcgatttttcgcttcaatccagaacaggatgagaagccgtacatgcaggat
tacgagattgaactggagacaaccgaccagatgctgctggatgtcattgtgcgtctcaag
gttcaggatgataccctcaccttcaggaggtcttgtcgcgaaggcgtgtgcggctctgac
gcgatgaacatcaacggccgcaacggactggcttgcattaccccggtgaggtcattaaag
cagcctatcaagttgcgtcccttgccgagcttcccggtcattcgcgacctggtggtcgac
atgacgcagttctttaaacagtatcattcgatcaaaccttacctgatcaacaatgaaccc
gcgccagaaagggaatgcttgcagtcgcctgaagacagggagaagctgagtggtttatac
gagtgcatcctgtgcgcatgttgtacgagccagtgttcttcgtcgtggtggaatccggat
aagtttgtcggcccggccggtcttttgcaggcgtatcgcttcattattgacagccgggat
caagccacgcaggaacggcttgatgacttgaacgacccttaccggctgttccgctgccgc
tcaatcatgaactgtaccgaggtttgccccaaaggtctggttccgtcccgtgcgatcgag
aagatccggttgatgatggtcaaggagtcgttttaa
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